RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 OPALINQ96PE5 141 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 VCXQ9H320 206 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 HES4Q9HCC6 221 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 TNFRSF19Q9NS68 423 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 CHCHD3Q9NX63 227 aaKnown RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 MTCH1Q9NZJ7 389 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 GLS2Q9UI32 602 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 TRBV2A0A0J9YWF9 115 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 ANKRD65E5RJM6 399 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 WBP4O75554 376 aaKnown RBP9.21□□□□□ -0.94
RFFL-204ENST00000414419 TK1P04183 234 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 HKR1P10072 659 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 DCKP27707 260 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 ERVK11-1P61568 191 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 COL10A1Q03692 680 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 IL18R1Q13478 541 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 NCR3LG1Q68D85 454 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 C16orf87Q6PH81 154 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 SERPINA12Q8IW75 414 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 OR51A4Q8NGJ6 313 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 OR5D14Q8NGL3 314 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 OR5D13Q8NGL4 314 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 OR13C9Q8NGT0 318 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 OR10AC1Q8NH08 325 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 CNIH3Q8TBE1 160 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 SSMEM1Q8WWF3 244 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 C1orf147Q96MC9 270 aaPredicted RBP9.21□□□□□ -0.94
RFFL-204ENST00000414419 FAM234AQ9H0X4 552 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 PRDM13Q9H4Q3 707 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 ZCCHC4Q9H5U6 513 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 FGF20Q9NP95 211 aaPredicted RBP9.21□□□□□ -0.94
RFFL-204ENST00000414419 DHDHQ9UQ10 334 aa9.21□□□□□ -0.94
RFFL-204ENST00000414419 DNHD1Q96M86 4753 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 IGKV1-9A0A0C4DH69 117 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 A0A0U1RQK1 487 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 A0A1W2PRD5 423 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 A0A1W2PRF3 423 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 A0A1W2PRM7 423 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 RNASEK-C17orf49H0YIS7 233 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 NPFFO15130 113 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 MAGEB3O15480 346 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 SPRY1O43609 319 aaPredicted RBP9.2□□□□□ -0.94
RFFL-204ENST00000414419 ZFPL1O95159 310 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 PAHP00439 452 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 MELTFP08582 738 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 HCKP08631 526 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 FBP1P09467 338 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 LIMS3P0CW19 117 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 LIMS4P0CW20 117 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 CFPP27918 469 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 CCDC58Q4VC31 144 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 AWAT1Q58HT5 328 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 GDPD3Q7L5L3 318 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 C8orf59Q8N0T1 100 aaPredicted RBP9.2□□□□□ -0.94
RFFL-204ENST00000414419 TMEM86BQ8N661 226 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 Q8N7P7 452 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 ZSCAN4Q8NAM6 433 aaPredicted RBP9.2□□□□□ -0.94
RFFL-204ENST00000414419 OR4M1Q8NGD0 313 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 RFT1Q96AA3 541 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 PDCD1LG2Q9BQ51 273 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 ZNF649Q9BS31 505 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 JAM3Q9BX67 310 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 DPAGT1Q9H3H5 408 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 C19orf12Q9NSK7 152 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 EXOSC1Q9Y3B2 195 aaKnown RBP9.2□□□□□ -0.94
RFFL-204ENST00000414419 SF3B6Q9Y3B4 125 aaKnown RBP9.2□□□□□ -0.94
RFFL-204ENST00000414419 PCDHGB5Q9Y5G0 923 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 POMT1Q9Y6A1 747 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 HSPE1-MOB4S4R3N1 261 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 KIAA2026Q5HYC2 2103 aa9.2□□□□□ -0.94
RFFL-204ENST00000414419 MEIOCA2RUB1 952 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 BTBD17A6NE02 478 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 E9PI62 339 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 F8VVB4 439 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 F8VWA3 439 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 K7N7A8 449 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 ANGPTL7O43827 346 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 CD2P06729 351 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 PRKACAP17612 351 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 BCL3P20749 454 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 CAPGP40121 348 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 NPBWR2P48146 333 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 ETV1P50549 477 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 UBE2E1P51965 193 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 GTF2A1P52655 376 aaPredicted RBP9.19□□□□□ -0.94
RFFL-204ENST00000414419 EDDM3BP56851 147 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 ADARB1P78563 741 aaKnown RBP9.19□□□□□ -0.94
RFFL-204ENST00000414419 PRB3Q04118 309 aaPredicted RBP9.19□□□□□ -0.94
RFFL-204ENST00000414419 PDZK1IP1Q13113 114 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 KLRD1Q13241 179 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 OGFRL1Q5TC84 451 aaPredicted RBP9.19□□□□□ -0.94
RFFL-204ENST00000414419 TMEM200BQ69YZ2 307 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 RPL22L1Q6P5R6 122 aaKnown RBP9.19□□□□□ -0.94
RFFL-204ENST00000414419 FAM58AQ8N1B3 248 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 PIP4P2Q8N4L2 257 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 PPP1R35Q8TAP8 253 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 CPNE2Q96FN4 548 aaPredicted RBP9.19□□□□□ -0.94
RFFL-204ENST00000414419 TMEM80Q96HE8 168 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 SNX22Q96L94 193 aa9.19□□□□□ -0.94
RFFL-204ENST00000414419 DCLRE1BQ9H816 532 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms