RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 GPR37O15354 613 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 SOCS1O15524 211 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 SERPINA2P20848 420 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 MPV17P39210 176 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 CASP6P55212 293 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 NKX6-1P78426 367 aaPredicted RBP4.71□□□□□ -1.65
EPHA4-202ENST00000409854 DAZAP2Q15038 168 aaPredicted RBP4.71□□□□□ -1.65
EPHA4-202ENST00000409854 FBXL19-AS1Q494R0 122 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 NHLRC3Q5JS37 347 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 PXDC1Q5TGL8 231 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 Q6ZTK2 550 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 C22orf34Q6ZV56 151 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 RTN4RL2Q86UN3 420 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 ZNF611Q8N823 705 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 TMEM229BQ8NBD8 167 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 ST8SIA4Q92187 359 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 UPRTQ96BW1 309 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 MUCL1Q96DR8 90 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 CCDC120Q96HB5 630 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 GPR61Q9BZJ8 451 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 PKIBQ9C010 78 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 COPZ2Q9P299 210 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 AUP1Q9Y679 476 aa4.71□□□□□ -1.65
EPHA4-202ENST00000409854 PRRC2CQ9Y520 2896 aaKnown RBP4.71□□□□□ -1.65
EPHA4-202ENST00000409854 A0A0B4J293 547 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM240BA0A1B0GVZ2 78 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 TMEM235A6NFC5 223 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF732B4DXR9 585 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 HSBP1L1C9JCN9 74 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 C16orf97H3BN30 126 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 ANGPTL7O43827 346 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 PTBP3O95758 552 aaKnown RBP4.71□□□□□ -1.66
EPHA4-202ENST00000409854 DHFRP00374 187 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 CD74P04233 296 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF83P51522 516 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 GPM6AP51674 278 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 GNG3P63215 75 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 LY6DQ14210 128 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 RSU1Q15404 277 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 CDNFQ49AH0 187 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 LBHQ53QV2 105 aaPredicted RBP4.71□□□□□ -1.66
EPHA4-202ENST00000409854 GLCCI1Q86VQ1 547 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 BHLHE23Q8NDY6 225 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 OR8G5Q8NG78 346 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 OR10K1Q8NGX5 313 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 CREB3L1Q96BA8 519 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 RAB3CQ96E17 227 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 SELENOIQ9C0D9 397 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 MMP28Q9H239 520 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 OR51I2Q9H344 312 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 RHOFQ9HBH0 211 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 PCDHB16Q9NRJ7 776 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 PURGQ9UJV8 347 aaKnown RBP4.71□□□□□ -1.66
EPHA4-202ENST00000409854 ELF5Q9UKW6 265 aaPredicted RBP4.71□□□□□ -1.66
EPHA4-202ENST00000409854 HSF4Q9ULV5 492 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 PIEZO1Q92508 2521 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 TRGV8A0A0C4DH27 118 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A10PA6NDY2 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A18PA6NE21 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A16PA6NEW6 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A20PA6NIJ5 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A8PA6NJQ4 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A7PA6NKC0 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A22PA8MWA6 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A12PA8MX19 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A5PA8MXJ8 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A23PA8MXZ1 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 M0R1B8 84 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 THBDP07204 575 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 SFTPBP07988 381 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A15PP0C7V4 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A13PP0C7W8 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A14PP0C7W9 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A24PP0C7X0 464 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 GTF2F2P13984 249 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF250P15622 560 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 PPP3CBP16298 524 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 GNB3P16520 340 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 ASCL1P50553 236 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 IL24Q13007 206 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 SNTB2Q13425 540 aaKnown RBP4.71□□□□□ -1.66
EPHA4-202ENST00000409854 ARL6IP1Q15041 203 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 PCGF3Q3KNV8 242 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 ALKBH6Q3KRA9 238 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 WDR86Q86TI4 376 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 FJX1Q86VR8 437 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF573Q86YE8 665 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 OSR2Q8N2R0 312 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 SLC24A4Q8NFF2 622 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 OR51T1Q8NGJ9 327 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 OR51F2Q8NH61 342 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 DVL3Q92997 716 aaPredicted RBP4.71□□□□□ -1.66
EPHA4-202ENST00000409854 RNF170Q96K19 258 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 RTL8AQ9BWD3 113 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 PECRQ9BY49 303 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 DPAGT1Q9H3H5 408 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 NLKQ9UBE8 527 aa4.71□□□□□ -1.66
EPHA4-202ENST00000409854 TANC2Q9HCD6 1990 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 LRP5LA4QPB2 252 aa4.7□□□□□ -1.66
EPHA4-202ENST00000409854 TMEM210A6NLX4 147 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms