RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ENSAO43768 121 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 KNG1P01042 644 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 TFF1P04155 84 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 PRDX2P32119 198 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 SRP14P37108 136 aaKnown RBP16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 GABARAPL2P60520 117 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 PPP3R1P63098 170 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 DGUOKQ16854 277 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 RNF144BQ7Z419 303 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 SAXO1Q8IYX7 474 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 MS4A15Q8N5U1 240 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 THRSPQ92748 146 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 RFT1Q96AA3 541 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 TMEM138Q9NPI0 162 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 CKLFQ9UBR5 152 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 AUP1Q9Y679 476 aa16.46■□□□□ 0.23
PDLIM2-207ENST00000409417 ZNF879B4DU55 563 aa16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 MRPS14O60783 128 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 GPX5O75715 221 aa16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 INMTO95050 263 aa16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 LIPFP07098 398 aa16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 SELLP14151 372 aa16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 TBCEQ15813 527 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 BTN2A1Q7KYR7 527 aa16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 CD177Q8N6Q3 437 aa16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 OR5D18Q8NGL1 313 aa16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 MRI1Q9BV20 369 aa16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 ISYNA1Q9NPH2 558 aa16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 SLC25A10Q9UBX3 287 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 MAB21L2Q9Y586 359 aa16.45■□□□□ 0.22
PDLIM2-207ENST00000409417 ALDOBP05062 364 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 HSMCR30P0CW71 290 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 IGFBP3P17936 291 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 MAPK3P27361 379 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 MAP2K4P45985 399 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 CAV3P56539 151 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 ZP1P60852 638 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 FAM58AQ8N1B3 248 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 FGFRL1Q8N441 504 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 ZNF561Q8N587 486 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 ZSCAN4Q8NAM6 433 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 ZNRF1Q8ND25 227 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 OR52N4Q8NGI2 321 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 UFD1Q92890 307 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 ORAI1Q96D31 301 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 DERL3Q96Q80 235 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 RBFOX1Q9NWB1 397 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 RPUSD1Q9UJJ7 312 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 ATRQ13535 2644 aa16.44■□□□□ 0.22
PDLIM2-207ENST00000409417 IGKV1-12A0A0C4DH73 117 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 ANGPTL7O43827 346 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 KDM4BO94953 1096 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 IGKV1D-12P01611 117 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 PPIAL4GP0DN37 164 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 TMEM225BP0DP42 221 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 FSTP19883 344 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 BCL3P20749 454 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 BDKRB2P30411 391 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 TGFBR2P37173 567 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 NPBWR2P48146 333 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 MLLT11Q13015 90 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 TPBGQ13641 420 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 LIPKQ5VXJ0 399 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 C1QL2Q7Z5L3 287 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 PNLDC1Q8NA58 520 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 NANPQ8TBE9 248 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 EMG1Q92979 244 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 RHOFQ9HBH0 211 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 OR14J1Q9UGF5 321 aa16.43■□□□□ 0.22
PDLIM2-207ENST00000409417 TRAV8-7A0A075B6U6 113 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 A0A1W2PPK0 400 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 ADRA2CP18825 462 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 FIP1L1Q6UN15 594 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 SATL1Q86VE3 508 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 TMEM185AQ8NFB2 350 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 DMRTB1Q96MA1 342 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 GPER1Q99527 375 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 MGLLQ99685 303 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 TMED9Q9BVK6 235 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 SEBOXQ9HB31 216 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 PIN1P1O15428 100 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 NDUFB7P17568 137 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 CEBPDP49716 269 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 ACSM3Q53FZ2 586 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 DDI2Q5TDH0 399 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 UNQ9370/PRO34162Q6UXP9 181 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 ZNF367Q7RTV3 350 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 LY6G5BQ8NDX9 201 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 PXT1Q8NFP0 134 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 DCTN5Q9BTE1 182 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 HMG20AQ9NP66 347 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 NOX4Q9NPH5 578 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 ACOT13Q9NPJ3 140 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 METRNQ9UJH8 293 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 FOXJ3Q9UPW0 622 aa16.42■□□□□ 0.22
PDLIM2-207ENST00000409417 IFNA2P01563 188 aa16.41■□□□□ 0.22
PDLIM2-207ENST00000409417 SFTPBP07988 381 aa16.41■□□□□ 0.22
PDLIM2-207ENST00000409417 CPEP16870 476 aa16.41■□□□□ 0.22
PDLIM2-207ENST00000409417 ZNF93P35789 620 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-207ENST00000409417 EMX1Q04741 257 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms