RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ZFP57Q9NU63 452 aa13.19□□□□□ -0.3
CHMP3-203ENST00000409225 LYVE1Q9Y5Y7 322 aa13.19□□□□□ -0.3
CHMP3-203ENST00000409225 LINC00312Q9Y6C7 94 aa13.19□□□□□ -0.3
CHMP3-203ENST00000409225 PQLC2LA1A4F0 135 aa13.18□□□□□ -0.3
CHMP3-203ENST00000409225 ATP6V1B1P15313 513 aa13.18□□□□□ -0.3
CHMP3-203ENST00000409225 SLC6A1P30531 599 aa13.18□□□□□ -0.3
CHMP3-203ENST00000409225 KRT77Q7Z794 578 aa13.18□□□□□ -0.3
CHMP3-203ENST00000409225 ZNF695Q8IW36 515 aa13.18□□□□□ -0.3
CHMP3-203ENST00000409225 ABHD12Q8N2K0 398 aa13.18□□□□□ -0.3
CHMP3-203ENST00000409225 AQP11Q8NBQ7 271 aa13.18□□□□□ -0.3
CHMP3-203ENST00000409225 CDRT15Q96T59 188 aa13.18□□□□□ -0.3
CHMP3-203ENST00000409225 IL1RAPQ9NPH3 570 aa13.18□□□□□ -0.3
CHMP3-203ENST00000409225 FAM206AQ9NX38 181 aa13.18□□□□□ -0.3
CHMP3-203ENST00000409225 HHLA2Q9UM44 414 aa13.18□□□□□ -0.3
CHMP3-203ENST00000409225 TMEM269A0A1B0GVZ9 245 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 TMEM82A0PJX8 343 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 FAM172BPA6NC97 362 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 M0QZK8 103 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 CCL24O00175 119 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 KRT36O76013 467 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 CCNB2O95067 398 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 ERVK11-1P61568 191 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 PPP1R8Q12972 351 aaKnown RBP13.17□□□□□ -0.3
CHMP3-203ENST00000409225 C9orf66Q5T8R8 295 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 PRAMEF5Q5TYX0 476 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 ZFAND6Q6FIF0 208 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 ANGPTL5Q86XS5 388 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 IQCF1Q8N6M8 205 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 CHPT1Q8WUD6 406 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 SNX22Q96L94 193 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 TEAD3Q99594 435 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 PBOV1Q9GZY1 135 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 SPAG4Q9NPE6 437 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 LINC00527Q9UJ94 153 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 MOB4Q9Y3A3 225 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 HSPE1-MOB4S4R3N1 261 aa13.17□□□□□ -0.3
CHMP3-203ENST00000409225 ACOD1A6NK06 481 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 LEUTXA8MZ59 168 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 INMTO95050 263 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 MPZP25189 248 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 HMGA2P52926 109 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 ESRRGP62508 458 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 BDH1Q02338 343 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 CLVS2Q5SYC1 327 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 MEPCEQ7L2J0 689 aaKnown RBP13.16□□□□□ -0.3
CHMP3-203ENST00000409225 TRAPPC6BQ86SZ2 158 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 SBSPONQ8IVN8 264 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 OR5M8Q8NGP6 311 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 ZNF596Q8TC21 504 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 CHST6Q9GZX3 395 aa13.16□□□□□ -0.3
CHMP3-203ENST00000409225 ARRDC5A6NEK1 342 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 SERPINE3A8MV23 424 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 F8VVB4 439 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 F8VWA3 439 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 DHRS3O75911 302 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 LY86O95711 162 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 IGLV3-1P01715 115 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 IGHA1P01876 353 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 GABRR1P24046 479 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 PEX2P28328 305 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 HCCSP53701 268 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 GRK1Q15835 563 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 DEFB136Q30KP8 78 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 TPTE2P1Q5T6R2 138 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 LCN1P1Q5VSP4 162 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 OR52N4Q8NGI2 321 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 TRMT10AQ8TBZ6 339 aaKnown RBP13.15□□□□□ -0.3
CHMP3-203ENST00000409225 ITFG2Q969R8 447 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 NSMCE2Q96MF7 247 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 MAGEL2Q9UJ55 1249 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 LAMP5Q9UJQ1 280 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 ZNF256Q9Y2P7 627 aaPredicted RBP13.15□□□□□ -0.3
CHMP3-203ENST00000409225 SMAD5-AS1Q9Y6J3 95 aa13.15□□□□□ -0.3
CHMP3-203ENST00000409225 A6NIN4 97 aa13.14□□□□□ -0.31
CHMP3-203ENST00000409225 SEC14L6B5MCN3 397 aa13.14□□□□□ -0.31
CHMP3-203ENST00000409225 SLC35B1P78383 322 aa13.14□□□□□ -0.31
CHMP3-203ENST00000409225 IL24Q13007 206 aa13.14□□□□□ -0.31
CHMP3-203ENST00000409225 TMEM42Q69YG0 159 aa13.14□□□□□ -0.31
CHMP3-203ENST00000409225 RTN4RL2Q86UN3 420 aa13.14□□□□□ -0.31
CHMP3-203ENST00000409225 TEX47Q8TBZ9 253 aa13.14□□□□□ -0.31
CHMP3-203ENST00000409225 CEP19Q96LK0 163 aa13.14□□□□□ -0.31
CHMP3-203ENST00000409225 PKIBQ9C010 78 aa13.14□□□□□ -0.31
CHMP3-203ENST00000409225 SCOCQ9UIL1 159 aa13.14□□□□□ -0.31
CHMP3-203ENST00000409225 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHMP3-203ENST00000409225 CSMD3Q7Z407 3707 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 PRR23D1E9PI22 279 aaPredicted RBP13.13□□□□□ -0.31
CHMP3-203ENST00000409225 DLGAP1O14490 977 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 ARPC2O15144 300 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 HAND1O96004 215 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 IGLV1-47P01700 117 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 FAM106CPP0CH98 169 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 PRR23D2P0DMB1 279 aaPredicted RBP13.13□□□□□ -0.31
CHMP3-203ENST00000409225 ALOX5APP20292 161 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 CDK2P24941 298 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 CEACAM3P40198 252 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 MNDAP41218 407 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 OR52W1Q6IF63 320 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 OR8U1Q8NH10 309 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 SLAMF9Q96A28 289 aa13.13□□□□□ -0.31
CHMP3-203ENST00000409225 DGCR6LQ9BY27 220 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms