RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 C1orf123Q9NWV4 160 aa13.24□□□□□ -0.29
LIMK2-204ENST00000406516 P4HTMQ9NXG6 502 aa13.24□□□□□ -0.29
LIMK2-204ENST00000406516 MEMO1Q9Y316 297 aa13.24□□□□□ -0.29
LIMK2-204ENST00000406516 LOC102723996A0A087X1L8 192 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 VAMP5O95183 116 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 COX6A1P12074 109 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 IL32P24001 234 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 ZNF84P51523 738 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 HIST1H3AP68431 136 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 SURF2Q15527 256 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-204ENST00000406516 TAF9Q16594 264 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 HIST2H3PS2Q5TEC6 136 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 OR2A2Q6IF42 318 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 HIST2H3AQ71DI3 136 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 CPNE2Q96FN4 548 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-204ENST00000406516 Q96M66 194 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 FAAP24Q9BTP7 215 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 ANGPTL4Q9BY76 406 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 SRXN1Q9BYN0 137 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 HPF1Q9NWY4 346 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 FOXD3Q9UJU5 478 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-204ENST00000406516 MSTNO14793 375 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 SSR4P51571 173 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 RRADP55042 308 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 ARL6IP1Q15041 203 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 OR5T2Q8NGG2 359 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 IMMP1LQ96LU5 166 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 DNAJB11Q9UBS4 358 aa13.23□□□□□ -0.29
LIMK2-204ENST00000406516 IGHEP01854 428 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 HKR1P10072 659 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 ZNF708P17019 499 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 NME2P22392 152 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 OPRM1P35372 400 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 ZNF133P52736 654 aaPredicted RBP13.22□□□□□ -0.29
LIMK2-204ENST00000406516 PJVKQ0ZLH3 352 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 RPUSD3Q6P087 351 aaKnown RBP13.22□□□□□ -0.29
LIMK2-204ENST00000406516 SGPP2Q8IWX5 399 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 FNDC9Q8TBE3 224 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 TAF9BQ9HBM6 251 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 ZNF891A8MT65 544 aaPredicted RBP13.22□□□□□ -0.29
LIMK2-204ENST00000406516 RSU1Q15404 277 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 ZNF774Q6NX45 483 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 C20orf196Q8IYI0 205 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 DYRK2Q92630 601 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 TOMM40LQ969M1 308 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 UQCC1Q9NVA1 299 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 ANXA10Q9UJ72 324 aa13.22□□□□□ -0.29
LIMK2-204ENST00000406516 DSPP15924 2871 aaKnown RBP13.21□□□□□ -0.29
LIMK2-204ENST00000406516 SGCEO43556 437 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 MED6O75586 246 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 FARS2O95363 451 aaKnown RBP13.21□□□□□ -0.29
LIMK2-204ENST00000406516 SCGB1D2O95969 90 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 APOC1P02654 83 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 CYC1P08574 325 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 PATE4P0C8F1 98 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 OR5H8P0DN80 308 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 LPAR6P43657 344 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 HGFACQ04756 655 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 ZNF468Q5VIY5 522 aaPredicted RBP13.21□□□□□ -0.29
LIMK2-204ENST00000406516 BRICD5Q6PL45 260 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 IL34Q6ZMJ4 242 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 MRPL24Q96A35 216 aaKnown RBP13.21□□□□□ -0.29
LIMK2-204ENST00000406516 REEP6Q96HR9 211 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 CNTNAP3Q9BZ76 1288 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 ZNF700Q9H0M5 742 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 METTL9Q9H1A3 318 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 LIME1Q9H400 295 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 SAV1Q9H4B6 383 aaPredicted RBP13.21□□□□□ -0.29
LIMK2-204ENST00000406516 RHOFQ9HBH0 211 aa13.21□□□□□ -0.29
LIMK2-204ENST00000406516 TMEM8BA6NDV4 472 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 NUDT19A8MXV4 375 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 AGPAT2O15120 278 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 FBXO24O75426 580 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 RPL12P30050 165 aaKnown RBP13.21□□□□□ -0.3
LIMK2-204ENST00000406516 NPBWR1P48145 328 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 EXT1Q16394 746 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 NSUN5P2Q63ZY6 315 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 RTL6Q6ICC9 239 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 PLXDC2Q6UX71 529 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 SMIM3Q9BZL3 60 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 CRLF2Q9HC73 371 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 AK3Q9UIJ7 227 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 LHX6Q9UPM6 363 aa13.21□□□□□ -0.3
LIMK2-204ENST00000406516 CARHSP1Q9Y2V2 147 aaKnown RBP13.21□□□□□ -0.3
LIMK2-204ENST00000406516 LSM5Q9Y4Y9 91 aaKnown RBP13.21□□□□□ -0.3
LIMK2-204ENST00000406516 IGKV1-27A0A075B6S5 117 aa13.2□□□□□ -0.3
LIMK2-204ENST00000406516 NSG1A0A0A6YYJ2 146 aa13.2□□□□□ -0.3
LIMK2-204ENST00000406516 H7C2Y5 167 aa13.2□□□□□ -0.3
LIMK2-204ENST00000406516 K7EPK0 472 aa13.2□□□□□ -0.3
LIMK2-204ENST00000406516 CA11O75493 328 aa13.2□□□□□ -0.3
LIMK2-204ENST00000406516 LCATP04180 440 aa13.2□□□□□ -0.3
LIMK2-204ENST00000406516 CTSDP07339 412 aaPredicted RBP13.2□□□□□ -0.3
LIMK2-204ENST00000406516 MUC1P15941 1255 aaPredicted RBP13.2□□□□□ -0.3
LIMK2-204ENST00000406516 MRPS34P82930 218 aaKnown RBP13.2□□□□□ -0.3
LIMK2-204ENST00000406516 Q0VFX4 171 aa13.2□□□□□ -0.3
LIMK2-204ENST00000406516 PPA1Q15181 289 aa13.2□□□□□ -0.3
LIMK2-204ENST00000406516 DEFB109BQ30KR1 87 aa13.2□□□□□ -0.3
LIMK2-204ENST00000406516 FAM27BQ5VT28 67 aa13.2□□□□□ -0.3
LIMK2-204ENST00000406516 Q6ZSR3 168 aa13.2□□□□□ -0.3
LIMK2-204ENST00000406516 RPS19BP1Q86WX3 136 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms