RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 OR52M1Q8NGK5 317 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 OR11L1Q8NGX0 322 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 OR8U1Q8NH10 309 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 OR1F12Q8NHA8 337 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 ARL11Q969Q4 196 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 SAT2Q96F10 170 aaPredicted RBP8.51□□□□□ -1.05
MSH2-202ENST00000406134 GALNT14Q96FL9 552 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 NARS2Q96I59 477 aaKnown RBP8.51□□□□□ -1.05
MSH2-202ENST00000406134 SF3B5Q9BWJ5 86 aaKnown RBP8.51□□□□□ -1.05
MSH2-202ENST00000406134 METTL8Q9H825 291 aaKnown RBP8.51□□□□□ -1.05
MSH2-202ENST00000406134 NXT1Q9UKK6 140 aaKnown RBP8.51□□□□□ -1.05
MSH2-202ENST00000406134 K7EPK0 472 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 SGCEO43556 437 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 OR5AC1P0C628 307 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 MTCP1P56278 107 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 RAC3P60763 192 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 CHAF1BQ13112 559 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 IAH1Q2TAA2 248 aaPredicted RBP8.51□□□□□ -1.05
MSH2-202ENST00000406134 SP5Q6BEB4 398 aaPredicted RBP8.51□□□□□ -1.05
MSH2-202ENST00000406134 H3F3CQ6NXT2 135 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 YRDCQ86U90 279 aaKnown RBP8.51□□□□□ -1.05
MSH2-202ENST00000406134 SVBPQ8N300 66 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 FAM71E2Q8N5Q1 922 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 CPEB3Q8NE35 698 aaKnown RBP8.51□□□□□ -1.05
MSH2-202ENST00000406134 SPSB1Q96BD6 273 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 TSNAXQ99598 290 aaKnown RBP8.51□□□□□ -1.05
MSH2-202ENST00000406134 TAF9BQ9HBM6 251 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 OR2S2Q9NQN1 319 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 PLEKHJ1Q9NW61 149 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 C1orf123Q9NWV4 160 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 HPF1Q9NWY4 346 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 IL36GQ9NZH8 169 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 PRELID3BQ9Y3B1 194 aa8.51□□□□□ -1.05
MSH2-202ENST00000406134 PRSS44E7EML9 344 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 TLX3O43711 291 aaPredicted RBP8.5□□□□□ -1.05
MSH2-202ENST00000406134 SERPINA5P05154 406 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 HEXAP06865 529 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 OR5H8P0DN80 308 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 DTYMKP23919 212 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 GFRA1P56159 465 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 TMEM33P57088 247 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 S100A10P60903 97 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 PDCD1Q15116 288 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 SKA3Q8IX90 412 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 GLYATL2Q8WU03 294 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 SPSB4Q96A44 273 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 INTS12Q96CB8 462 aaKnown RBP8.5□□□□□ -1.05
MSH2-202ENST00000406134 JSRP1Q96MG2 331 aaPredicted RBP8.5□□□□□ -1.05
MSH2-202ENST00000406134 C12orf57Q99622 126 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 HRH4Q9H3N8 390 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 PCDHB16Q9NRJ7 776 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 GSKIPQ9P0R6 139 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 DKKL1Q9UK85 242 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 PADI1Q9ULC6 663 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 SIT1Q9Y3P8 196 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 NBEAQ8NFP9 2946 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 ARID1AO14497 2285 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 FAM221AA4D161 298 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 CBR3O75828 277 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 GAPDHP04406 335 aaKnown RBP8.5□□□□□ -1.05
MSH2-202ENST00000406134 TMEM225BP0DP42 221 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 RPL12P30050 165 aaKnown RBP8.5□□□□□ -1.05
MSH2-202ENST00000406134 KCNJ3P48549 501 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 PIGPP57054 158 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 FOXO1Q12778 655 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 LYZL2Q7Z4W2 148 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 Q8NFD4 153 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 OR5T2Q8NGG2 359 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 OR2H1Q9GZK4 316 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 NDRG3Q9UGV2 375 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 A0A1B0GW55 424 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 FAM230AA0A1W2PPH8 454 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 NUDT19A8MXV4 375 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 SS18L1O75177 396 aaPredicted RBP8.5□□□□□ -1.05
MSH2-202ENST00000406134 DUX4L2P0CJ85 424 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 DUX4L3P0CJ86 424 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 DUX4L4P0CJ87 422 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 DUX4L5P0CJ88 424 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 DUX4L6P0CJ89 424 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 DUX4L7P0CJ90 424 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 NME2P22392 152 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 HOXA6P31267 233 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 NPBWR2P48146 333 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 FAM189A2Q15884 450 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 C21orf62-AS1Q17RA5 79 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 COLCA1Q6ZS62 124 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 RPS19BP1Q86WX3 136 aaKnown RBP8.5□□□□□ -1.05
MSH2-202ENST00000406134 PSMF1Q92530 271 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 SPTSSAQ969W0 71 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 ZNF845Q96IR2 970 aaPredicted RBP8.5□□□□□ -1.05
MSH2-202ENST00000406134 SCGB3A2Q96PL1 93 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 PRRX2Q99811 253 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 NAA60Q9H7X0 242 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 DUX4Q9UBX2 424 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 RFNGQ9Y644 331 aa8.5□□□□□ -1.05
MSH2-202ENST00000406134 TECTAO75443 2155 aa8.49□□□□□ -1.05
MSH2-202ENST00000406134 COLCA2A8K830 154 aa8.49□□□□□ -1.05
MSH2-202ENST00000406134 F8W036 122 aa8.49□□□□□ -1.05
MSH2-202ENST00000406134 H7C1Q1 480 aa8.49□□□□□ -1.05
MSH2-202ENST00000406134 BLOC1S1P78537 153 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms