RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SIAH2O43255 324 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 RBBP9O75884 186 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 C1QL1O75973 258 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 SCGNO76038 276 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 NXPH2O95156 264 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 SERPINF1P36955 418 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 TMEM50BP56557 158 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 GNG2P59768 71 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 ARFRP1Q13795 201 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 FAM189A2Q15884 450 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 PCGF3Q3KNV8 242 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 NRARPQ7Z6K4 114 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 CDH24Q86UP0 819 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 BOLLQ8N9W6 283 aaKnown RBP3.15□□□□□ -1.91
RTN4-208ENST00000404909 ZSCAN4Q8NAM6 433 aaPredicted RBP3.15□□□□□ -1.91
RTN4-208ENST00000404909 TRIM63Q969Q1 353 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 COX4I2Q96KJ9 171 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 NEDD4LQ96PU5 975 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 OR2V2Q96R30 315 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 MCUBQ9NWR8 336 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 ING3Q9NXR8 418 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 CISD1Q9NZ45 108 aaKnown RBP3.15□□□□□ -1.91
RTN4-208ENST00000404909 KMT2BQ9UMN6 2715 aaPredicted RBP3.15□□□□□ -1.91
RTN4-208ENST00000404909 A0A0A6YYH2 397 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 UBE2QL1A1L167 161 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 A6NJ64 397 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 E7EQL1 145 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 C19orf84I3L1E1 186 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 CTDSPLO15194 276 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 PLA2G10O15496 165 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 LYRM1O43325 122 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 MT-ND4P03905 459 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 HIST1H1DP16402 221 aaKnown RBP3.15□□□□□ -1.91
RTN4-208ENST00000404909 HLA-DMAP28067 261 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 RBM11P57052 281 aaKnown RBP3.15□□□□□ -1.91
RTN4-208ENST00000404909 CCL8P80075 99 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 MRPS10P82664 201 aaKnown RBP3.15□□□□□ -1.91
RTN4-208ENST00000404909 IL24Q13007 206 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 IKZF1Q13422 519 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 ZNF260Q3ZCT1 412 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 SPRNQ5BIV9 151 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 FAM76BQ5HYJ3 339 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 FAAP20Q6NZ36 180 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 ASCL4Q6XD76 172 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 TRAPPC6BQ86SZ2 158 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 DMRTC2Q8IXT2 367 aaPredicted RBP3.15□□□□□ -1.91
RTN4-208ENST00000404909 FAM58AQ8N1B3 248 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 GVQW1Q8N7I0 195 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 SPERTQ8NA61 448 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 ENKURQ8TC29 256 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 NEK7Q8TDX7 302 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 DYRK2Q92630 601 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 SEH1LQ96EE3 360 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 FAAP24Q9BTP7 215 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 WDR13Q9H1Z4 485 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 DYNLRB1Q9NP97 96 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 C1orf123Q9NWV4 160 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 RABL2AQ9UBK7 228 aaPredicted RBP3.15□□□□□ -1.91
RTN4-208ENST00000404909 OR14J1Q9UGF5 321 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 RABL2BQ9UNT1 228 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 POLDIP2Q9Y2S7 368 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 KCNK7Q9Y2U2 307 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 FAM240BA0A1B0GVZ2 78 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 FAM221AA4D161 298 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 TMEM210A6NLX4 147 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 CENPXA8MT69 81 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 HS3ST1O14792 307 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 WNT9BO14905 357 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 GSTZ1O43708 216 aaPredicted RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 ZNF205O95201 554 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 CSN2P05814 226 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 LPLP06858 475 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 SPNP16150 400 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MRPS15P82914 257 aaKnown RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 TNFAIP6P98066 277 aaPredicted RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 MZT1Q08AG7 82 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 ASAH1Q13510 395 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 HACD4Q5VWC8 232 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 SFRP4Q6FHJ7 346 aaPredicted RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 SIGIRRQ6IA17 410 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 GDPD3Q7L5L3 318 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MOGAT3Q86VF5 341 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 GLCCI1Q86VQ1 547 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 TMEM200AQ86VY9 491 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 BPIFB2Q8N4F0 458 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 FAM89BQ8N5H3 189 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 OR4S1Q8NGB4 309 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 ITLN1Q8WWA0 313 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MAFIPQ8WZ33 124 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MRPS24Q96EL2 167 aaKnown RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 ST6GALNAC5Q9BVH7 336 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 TM2D1Q9BX74 207 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 PECRQ9BY49 303 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 PKIBQ9C010 78 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MMP28Q9H239 520 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 ZNF442Q9H7R0 627 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 IFT46Q9NQC8 304 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 ZNF701Q9NV72 531 aaPredicted RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 IL36GQ9NZH8 169 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 ZNF230Q9UIE0 474 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms