RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZNF295-AS1Q8N0V1 137 aa17.88■□□□□ 0.45
TPM1-208ENST00000404484 TMEM171Q8WVE6 324 aa17.88■□□□□ 0.45
TPM1-208ENST00000404484 PLK3Q9H4B4 646 aa17.88■□□□□ 0.45
TPM1-208ENST00000404484 ESRP2Q9H6T0 727 aaKnown RBP17.88■□□□□ 0.45
TPM1-208ENST00000404484 ZMAT3Q9HA38 289 aaKnown RBP17.88■□□□□ 0.45
TPM1-208ENST00000404484 FZR1Q9UM11 496 aa17.88■□□□□ 0.45
TPM1-208ENST00000404484 ANKHD1Q8IWZ3 2542 aaKnown RBP17.88■□□□□ 0.45
TPM1-208ENST00000404484 A0A1B0GWJ7 208 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A10PA6NDY2 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A18PA6NE21 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A16PA6NEW6 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A20PA6NIJ5 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A8PA6NJQ4 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A7PA6NKC0 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FOXI3A8MTJ6 420 aaPredicted RBP17.87■□□□□ 0.45
TPM1-208ENST00000404484 SERPINE3A8MV23 424 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A22PA8MWA6 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A12PA8MX19 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A5PA8MXJ8 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A23PA8MXZ1 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 MFNGO00587 321 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 SFTPBP07988 381 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A15PP0C7V4 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A13PP0C7W8 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A14PP0C7W9 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAM90A24PP0C7X0 464 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 GUCA2AQ02747 115 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 SNTB1Q13884 538 aaKnown RBP17.87■□□□□ 0.45
TPM1-208ENST00000404484 PCGF3Q3KNV8 242 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 TMEM255AQ5JRV8 349 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 NHLRC3Q5JS37 347 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FBXL14Q8N1E6 418 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 PIAS4Q8N2W9 510 aaPredicted RBP17.87■□□□□ 0.45
TPM1-208ENST00000404484 DUSP18Q8NEJ0 188 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 SLAMF9Q96A28 289 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 ARHGAP5-AS1Q96IT6 56 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FAIMQ9NVQ4 179 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 DUSP13Q9UII6 198 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 FBN2P35556 2912 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 IGLV3-9A0A075B6K5 115 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 DPRXA6NFQ7 191 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 VSTM5A8MXK1 200 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 ABCD4O14678 606 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 CA11O75493 328 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 SPNP16150 400 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 GABRR1P24046 479 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 RCVRNP35243 200 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 TMEM50BP56557 158 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 RBM11P57052 281 aaKnown RBP17.87■□□□□ 0.45
TPM1-208ENST00000404484 FGF12P61328 243 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 BSPH1Q075Z2 132 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 PLAC9Q5JTB6 97 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 SLC22A25Q6T423 547 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 Q8IYB0 196 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 COPZ2Q9P299 210 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 HSF4Q9ULV5 492 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 ST3GAL6Q9Y274 331 aa17.87■□□□□ 0.45
TPM1-208ENST00000404484 APCP25054 2843 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 hCG_2014768A0A024R1R8 64 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 PLSCR5A0PG75 271 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 TPD52L2O43399 206 aaKnown RBP17.86■□□□□ 0.45
TPM1-208ENST00000404484 SSX4O60224 188 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 BCL3P20749 454 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 SLC6A1P30531 599 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 CBX5P45973 191 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 OLFML2AQ68BL7 652 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 VHLLQ6RSH7 139 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 PLET1Q6UQ28 207 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 TRAPPC6BQ86SZ2 158 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 LINC00596Q86U02 117 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 NEDD4LQ96PU5 975 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 DPAGT1Q9H3H5 408 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 ZNF442Q9H7R0 627 aa17.86■□□□□ 0.45
TPM1-208ENST00000404484 MLNRO43193 412 aa17.85■□□□□ 0.45
TPM1-208ENST00000404484 KIR2DL3P43628 341 aa17.85■□□□□ 0.45
TPM1-208ENST00000404484 TAS2R19P59542 299 aa17.85■□□□□ 0.45
TPM1-208ENST00000404484 TAF9Q16594 264 aa17.85■□□□□ 0.45
TPM1-208ENST00000404484 TMEM229BQ8NBD8 167 aa17.85■□□□□ 0.45
TPM1-208ENST00000404484 PECRQ9BY49 303 aa17.85■□□□□ 0.45
TPM1-208ENST00000404484 HRASLSQ9HDD0 168 aa17.85■□□□□ 0.45
TPM1-208ENST00000404484 IFT46Q9NQC8 304 aa17.85■□□□□ 0.45
TPM1-208ENST00000404484 CA10Q9NS85 328 aa17.85■□□□□ 0.45
TPM1-208ENST00000404484 PLEKHJ1Q9NW61 149 aa17.85■□□□□ 0.45
TPM1-208ENST00000404484 MTCH1Q9NZJ7 389 aa17.85■□□□□ 0.45
TPM1-208ENST00000404484 SYNGR1O43759 233 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 AKAIN1P0CW23 69 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 NPBWR2P48146 333 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 ZNF154Q13106 437 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 ARFRP1Q13795 201 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 MPV17LQ2QL34 196 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 PIGYQ3MUY2 71 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 SCCPDHQ8NBX0 429 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 OR10AD1Q8NGE0 317 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 ST8SIA4Q92187 359 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 MRPL24Q96A35 216 aaKnown RBP17.84■□□□□ 0.45
TPM1-208ENST00000404484 ATP23Q9Y6H3 246 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 TEX15Q9BXT5 2789 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 TACC2O95359 2948 aa17.84■□□□□ 0.45
TPM1-208ENST00000404484 GEMIN2O14893 280 aaKnown RBP17.83■□□□□ 0.45
TPM1-208ENST00000404484 ACAA1P09110 424 aaPredicted RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms