RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 KLK11Q9UBX7 282 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 FOXJ3Q9UPW0 622 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 U3KQ87 197 aa9.97□□□□□ -0.81
SKA3-203ENST00000400018 ARID1AO14497 2285 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 TRAV18A0A075B6X5 111 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 NDUFS6O75380 124 aaKnown RBP9.96□□□□□ -0.81
SKA3-203ENST00000400018 GNB3P16520 340 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 TAF9Q16594 264 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 FAM166AQ6J272 317 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 ZNF529Q6P280 563 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 ZNF611Q8N823 705 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 SETD6Q8TBK2 473 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 TMEM171Q8WVE6 324 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 CREB3L1Q96BA8 519 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 HDHD3Q9BSH5 251 aaPredicted RBP9.96□□□□□ -0.81
SKA3-203ENST00000400018 PIGMQ9H3S5 423 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 CA10Q9NS85 328 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 A3GALT2U3KPV4 340 aa9.96□□□□□ -0.81
SKA3-203ENST00000400018 APOC1P02654 83 aa9.96□□□□□ -0.82
SKA3-203ENST00000400018 COX5BP10606 129 aa9.96□□□□□ -0.82
SKA3-203ENST00000400018 FSTP19883 344 aa9.96□□□□□ -0.82
SKA3-203ENST00000400018 BCL3P20749 454 aa9.96□□□□□ -0.82
SKA3-203ENST00000400018 PTGFRP43088 359 aa9.96□□□□□ -0.82
SKA3-203ENST00000400018 CCL8P80075 99 aa9.96□□□□□ -0.82
SKA3-203ENST00000400018 MAB21L1Q13394 359 aa9.96□□□□□ -0.82
SKA3-203ENST00000400018 RGS7BPQ6MZT1 257 aaPredicted RBP9.96□□□□□ -0.82
SKA3-203ENST00000400018 DMRTC2Q8IXT2 367 aaPredicted RBP9.96□□□□□ -0.82
SKA3-203ENST00000400018 CHST4Q8NCG5 386 aa9.96□□□□□ -0.82
SKA3-203ENST00000400018 OR8S1Q8NH09 359 aa9.96□□□□□ -0.82
SKA3-203ENST00000400018 SELENOIQ9C0D9 397 aa9.96□□□□□ -0.82
SKA3-203ENST00000400018 TRAV6A0A075B6T7 132 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 TMEM235A6NFC5 223 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 LINC00587B1AMM8 73 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 LYNX1G3V0Z9 82 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 PDCD5O14737 125 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 LYNX1P0DP58 116 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 ASCL1P50553 236 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 NKAPLQ5M9Q1 402 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 C9orf62Q8N4C0 152 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 OR51F2Q8NH61 342 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 ADAT1Q9BUB4 502 aaKnown RBP9.95□□□□□ -0.82
SKA3-203ENST00000400018 PURGQ9UJV8 347 aaKnown RBP9.95□□□□□ -0.82
SKA3-203ENST00000400018 AMDHD2Q9Y303 409 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 ZNF469Q96JG9 3925 aaPredicted RBP9.95□□□□□ -0.82
SKA3-203ENST00000400018 TRAV39A0A0B4J263 110 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 CDC14BO60729 498 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 CTAG2O75638 210 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 ETV6P41212 452 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 TATDN3Q17R31 274 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 ZDHHC23Q8IYP9 409 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 GVQW1Q8N7I0 195 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 UBALD1Q8TB05 177 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 NUDCD2Q8WVJ2 157 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 NRGNQ92686 78 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 LINC00052Q96N35 136 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 C11orf54Q9H0W9 315 aaPredicted RBP9.95□□□□□ -0.82
SKA3-203ENST00000400018 MTCH1Q9NZJ7 389 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 TAAR3PQ9P1P4 343 aa9.95□□□□□ -0.82
SKA3-203ENST00000400018 A6NLC8 198 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 ANKRD30BLA7E2S9 258 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 E7EQL1 145 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 GEMIN2O14893 280 aaKnown RBP9.94□□□□□ -0.82
SKA3-203ENST00000400018 BTF3P20290 206 aaKnown RBP9.94□□□□□ -0.82
SKA3-203ENST00000400018 GCH1P30793 250 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 KIR2DL3P43628 341 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 TUSC1Q2TAM9 212 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 BPIFB2Q8N4F0 458 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 SSC4DQ8WTU2 575 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 AP3S1Q92572 193 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 SRRQ9GZT4 340 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 SLC22A4Q9H015 551 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 PCDHB16Q9NRJ7 776 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 MCUBQ9NWR8 336 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 ZNF230Q9UIE0 474 aaPredicted RBP9.94□□□□□ -0.82
SKA3-203ENST00000400018 PRELID3BQ9Y3B1 194 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 HLA-DQB1P01920 261 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 CSN2P05814 226 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 GLAP06280 429 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 CSF3P09919 207 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 OR4A8P0C604 315 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 RBP2P50120 134 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 ZP1P60852 638 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 ZNF154Q13106 437 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 TMEM108Q6UXF1 575 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 C6orf201Q7Z4U5 140 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 SORCS2Q96PQ0 1159 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 ALG5Q9Y673 324 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 ZANQ9Y493 2812 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 ARHGAP32A7KAX9 2087 aa9.94□□□□□ -0.82
SKA3-203ENST00000400018 IGHV3OR15-7A0A075B7D8 119 aa9.93□□□□□ -0.82
SKA3-203ENST00000400018 SHISA9B4DS77 424 aa9.93□□□□□ -0.82
SKA3-203ENST00000400018 RAD52P43351 418 aa9.93□□□□□ -0.82
SKA3-203ENST00000400018 NKX6-1P78426 367 aaPredicted RBP9.93□□□□□ -0.82
SKA3-203ENST00000400018 QRFPP83859 136 aa9.93□□□□□ -0.82
SKA3-203ENST00000400018 GRK1Q15835 563 aa9.93□□□□□ -0.82
SKA3-203ENST00000400018 PLAC9Q5JTB6 97 aa9.93□□□□□ -0.82
SKA3-203ENST00000400018 TMEM69Q5SWH9 247 aa9.93□□□□□ -0.82
SKA3-203ENST00000400018 TMEM42Q69YG0 159 aa9.93□□□□□ -0.82
SKA3-203ENST00000400018 KRT74Q7RTS7 529 aa9.93□□□□□ -0.82
SKA3-203ENST00000400018 FBXL14Q8N1E6 418 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms