RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 ZNF133P52736 654 aaPredicted RBP8.25□□□□□ -1.09
COL28A1-201ENST00000399429 MGAT2Q10469 447 aa8.25□□□□□ -1.09
COL28A1-201ENST00000399429 FAM53BQ14153 422 aa8.25□□□□□ -1.09
COL28A1-201ENST00000399429 ISXQ2M1V0 245 aa8.25□□□□□ -1.09
COL28A1-201ENST00000399429 POC1AQ8NBT0 407 aa8.25□□□□□ -1.09
COL28A1-201ENST00000399429 PIGCQ92535 297 aa8.25□□□□□ -1.09
COL28A1-201ENST00000399429 VOPP1Q96AW1 172 aa8.25□□□□□ -1.09
COL28A1-201ENST00000399429 ANKRD9Q96BM1 317 aaPredicted RBP8.25□□□□□ -1.09
COL28A1-201ENST00000399429 DDIT4LQ96D03 193 aa8.25□□□□□ -1.09
COL28A1-201ENST00000399429 ZNF665Q9H7R5 613 aa8.25□□□□□ -1.09
COL28A1-201ENST00000399429 LYRM4Q9HD34 91 aa8.25□□□□□ -1.09
COL28A1-201ENST00000399429 MARCH11A6NNE9 402 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 PRR32B1ATL7 298 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 ACRP10323 421 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 RAB7AP51149 207 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 DPTQ07507 201 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 LINC01590Q5TEZ4 76 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 BTNL3Q6UXE8 466 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 PHOSPHO2Q8TCD6 241 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 SHDQ96IW2 340 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 NAT8Q9UHE5 227 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 RNF212BA8MTL3 300 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 KIAA1324LA8MWY0 1029 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-201ENST00000399429 NPIPA2E9PIF3 369 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 NPIPA3F8WFD2 350 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 CYBAP13498 195 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 FAHP16930 419 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 CHRNB4P30926 498 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 HINT1P49773 126 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-201ENST00000399429 ZNF121P58317 390 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-201ENST00000399429 FAM3BP58499 235 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-201ENST00000399429 ERVFRD-1P60508 538 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 COL10A1Q03692 680 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 MST1LQ2TV78 715 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 UNQ6494/PRO21346Q6UXR6 183 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 GRINAQ7Z429 371 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 AQP3Q92482 292 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 FGF11Q92914 225 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 STARD4Q96DR4 205 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 ADAT3Q96EY9 351 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-201ENST00000399429 BMFQ96LC9 184 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 TMEM208Q9BTX3 173 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 MRPS2Q9Y399 296 aaKnown RBP8.24□□□□□ -1.09
COL28A1-201ENST00000399429 UNC13CQ8NB66 2214 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 PTPRZ1P23471 2315 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-201ENST00000399429 A0A1W2PPV9 198 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 HPRT1P00492 218 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 MT-ATP6P00846 226 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 IGFBP4P22692 258 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 AMTP48728 403 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 KISS1Q15726 138 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 MLF2Q15773 248 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-201ENST00000399429 TMEM215Q68D42 235 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 VN1R4Q7Z5H5 301 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 OR5R1Q8NH85 324 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 HSPB9Q9BQS6 159 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 PARD6GQ9BYG4 376 aaPredicted RBP8.24□□□□□ -1.09
COL28A1-201ENST00000399429 IL21Q9HBE4 155 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 SRPK3Q9UPE1 567 aa8.24□□□□□ -1.09
COL28A1-201ENST00000399429 A0A0J9YY10 115 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 PRSS38A1L453 326 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 C4orf51C9J302 202 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 FGF5P12034 268 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 CRISP2P16562 243 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 TNFSF10P50591 281 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 RPS16P62249 146 aaKnown RBP8.23□□□□□ -1.09
COL28A1-201ENST00000399429 MFAP5Q13361 173 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 PRICKLE4Q2TBC4 344 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 HIKESHIQ53FT3 197 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 ZNF468Q5VIY5 522 aaPredicted RBP8.23□□□□□ -1.09
COL28A1-201ENST00000399429 DOK3Q7L591 496 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 CATSPERDQ86XM0 798 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 SPTSSAQ969W0 71 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 FOXQ1Q9C009 403 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 SLC25A22Q9H936 323 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 HDGFL3Q9Y3E1 203 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 SPRY1O43609 319 aaPredicted RBP8.23□□□□□ -1.09
COL28A1-201ENST00000399429 TNFP01375 233 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 HSPB1P04792 205 aaKnown RBP8.23□□□□□ -1.09
COL28A1-201ENST00000399429 CTSDP07339 412 aaPredicted RBP8.23□□□□□ -1.09
COL28A1-201ENST00000399429 ZNF735P0CB33 412 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 CDAP32320 146 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 PSG6Q00889 435 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 ZIC1Q15915 447 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 PLAC9Q5JTB6 97 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 C12orf76Q8N812 135 aaPredicted RBP8.23□□□□□ -1.09
COL28A1-201ENST00000399429 OR5AU1Q8NGC0 362 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 C11orf40Q8WZ69 217 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 HDHD3Q9BSH5 251 aaPredicted RBP8.23□□□□□ -1.09
COL28A1-201ENST00000399429 CTDSP1Q9GZU7 261 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 PLEKHA3Q9HB20 300 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 FGF22Q9HCT0 170 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 RNF150Q9ULK6 438 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 KIAA0100Q14667 2235 aaKnown RBP8.23□□□□□ -1.09
COL28A1-201ENST00000399429 AQP7P3A6NL99 342 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 PRRT4C9JH25 899 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 CTSVO60911 334 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 HHEXQ03014 270 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 PATE1Q8WXA2 126 aa8.23□□□□□ -1.09
COL28A1-201ENST00000399429 ABHD14AQ9BUJ0 271 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms