RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.21□□□□□ -0.629e-8■■□□□ 13.1
SEC13-209ENST00000397117 A0A1B0GWJ7 208 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 F5H5P2 479 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 LDLRAD4O15165 306 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 SPRY3O43610 288 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 MPIG6BO95866 241 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 GRPP07492 148 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 TNFSF4P23510 183 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 EFNB2P52799 333 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 QRFPP83859 136 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 PLA2G7Q13093 441 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 MADCAM1Q13477 382 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 IL18Q14116 193 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 FAM189A2Q15884 450 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 METAP1DQ6UB28 335 aaPredicted RBP11.2□□□□□ -0.62
SEC13-209ENST00000397117 Q6ZNX1 250 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 SAXO1Q8IYX7 474 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 PXT1Q8NFP0 134 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 OR4M1Q8NGD0 313 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 OR10K1Q8NGX5 313 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 FBXW5Q969U6 566 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 ELMOD3Q96FG2 381 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 GAL3ST1Q99999 423 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 DHRS9Q9BPW9 319 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 TMEM59Q9BXS4 323 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 OR51I2Q9H344 312 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 DIABLOQ9NR28 239 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 ZDHHC8Q9ULC8 765 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 V9GYH0 126 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 ZSCAN5BA6NJL1 495 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 TMEM14DPA8MWL7 114 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 TRAPPC2LH3BP13 241 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 CDC14BO60729 498 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 HTR3BO95264 441 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 F12P00748 615 aaPredicted RBP11.2□□□□□ -0.62
SEC13-209ENST00000397117 IGHV4-39P01824 125 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 CDKN1AP38936 164 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 PITPNBP48739 271 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 UNC119Q13432 240 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 FAM76BQ5HYJ3 339 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 TMEM69Q5SWH9 247 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 BAIAP2L2Q6UXY1 529 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 ASCL4Q6XD76 172 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 DTX3Q8N9I9 347 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 GTF3AQ92664 365 aaKnown RBP11.2□□□□□ -0.62
SEC13-209ENST00000397117 C1orf147Q96MC9 270 aaPredicted RBP11.2□□□□□ -0.62
SEC13-209ENST00000397117 URM1Q9BTM9 101 aaKnown RBP11.2□□□□□ -0.62
SEC13-209ENST00000397117 PKIBQ9C010 78 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 BANF2Q9H503 90 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 MRPS7Q9Y2R9 242 aaKnown RBP11.2□□□□□ -0.62
SEC13-209ENST00000397117 POLDIP2Q9Y2S7 368 aa11.2□□□□□ -0.62
SEC13-209ENST00000397117 IGHV3-64DA0A0J9YX35 117 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 A8MV72 311 aaPredicted RBP11.19□□□□□ -0.62
SEC13-209ENST00000397117 B9A039 149 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 J3QT63 122 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 M0R233 179 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 PHF1O43189 567 aaPredicted RBP11.19□□□□□ -0.62
SEC13-209ENST00000397117 NDUFS7O75251 213 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 GTF2F2P13984 249 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 MGMTP16455 207 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 CDK2P24941 298 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 PTBP1P26599 531 aaKnown RBP eCLIP11.19□□□□□ -0.622e-7■■■■■ 31.3
SEC13-209ENST00000397117 SRP9P49458 86 aaKnown RBP11.19□□□□□ -0.62
SEC13-209ENST00000397117 IL24Q13007 206 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 ZNF154Q13106 437 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 CHRFAM7AQ494W8 412 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 PYDC2Q56P42 97 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 FBXL14Q8N1E6 418 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 SCCPDHQ8NBX0 429 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 TMEM104Q8NE00 496 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 SLAMF9Q96A28 289 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 SELENOIQ9C0D9 397 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 IL36GQ9NZH8 169 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 RABL2AQ9UBK7 228 aaPredicted RBP11.19□□□□□ -0.62
SEC13-209ENST00000397117 RABL2BQ9UNT1 228 aa11.19□□□□□ -0.62
SEC13-209ENST00000397117 A0A0A6YYH2 397 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 IGKV1-12A0A0C4DH73 117 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 A0A1W2PP11 408 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 A6NJ64 397 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 A6NLC8 198 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 CDIPTO14735 213 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 XRCC3O43542 346 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 SCGNO76038 276 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 IGKV1D-12P01611 117 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 CD8AP01732 235 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 MPZP25189 248 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 CD200P41217 278 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 NR4A2P43354 598 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 PITPNAQ00169 270 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 MAB21L1Q13394 359 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 EFNB3Q15768 340 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 RAB12Q6IQ22 244 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 C16orf87Q6PH81 154 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 WDR86Q86TI4 376 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 IZUMO1Q8IYV9 350 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 MUC15Q8N387 334 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 OR51T1Q8NGJ9 327 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 AQP3Q92482 292 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 PPP1R14BQ96C90 147 aa11.18□□□□□ -0.62
SEC13-209ENST00000397117 MRPS24Q96EL2 167 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms