RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 GMPPAQ96IJ6 420 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-205ENST00000397017 COL25A1Q9BXS0 654 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-205ENST00000397017 TMEM100Q9NV29 134 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 SHPKQ9UHJ6 478 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 ATG2AQ2TAZ0 1938 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 NPIPB13A6NJU9 1138 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 NPIPB4C9JG80 1138 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 ISG15P05161 165 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 FUT3P21217 361 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 NFYBP25208 207 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 UNC119Q13432 240 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 MICBQ29980 383 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 C10orf128Q5T292 105 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 TPRX1Q8N7U7 411 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 ZFP62Q8NB50 900 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-205ENST00000397017 RRNAD1Q96FB5 475 aaKnown RBP13.19□□□□□ -0.3
MCF2L-205ENST00000397017 PECRQ9BY49 303 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 AGTR1P30556 359 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 B3GALT5-AS1P59052 145 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 RGS7BPQ6MZT1 257 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-205ENST00000397017 PPP1R3CQ9UQK1 317 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 KCNMB2Q9Y691 235 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 ZFYVE26Q68DK2 2539 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 ADAP1O75689 374 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 HPNP05981 417 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 TCF15Q12870 199 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 OPCMLQ14982 345 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 NDUFA5Q16718 116 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 AADACL3Q5VUY0 350 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 OCSTAMPQ9BR26 566 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 PARP12Q9H0J9 701 aaKnown RBP13.18□□□□□ -0.3
MCF2L-205ENST00000397017 RGCCQ9H4X1 137 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.18□□□□□ -0.3
MCF2L-205ENST00000397017 NECAP2Q9NVZ3 263 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 UBQLN2Q9UHD9 624 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 TP53TG5Q9Y2B4 290 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 E9PLN8 166 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 KCNAB3O43448 404 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 SYNGR1O43759 233 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 C1QBP02746 253 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 PIGPP57054 158 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 FAM3AP98173 230 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 CDK10Q15131 360 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 PRAMEF6Q5VXH4 476 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 GLDNQ6ZMI3 551 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-205ENST00000397017 TMEM229BQ8NBD8 167 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 TMEM185AQ8NFB2 350 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 GPX8Q8TED1 209 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 NPAP1Q9NZP6 1156 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 ICMTO60725 284 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 RGS11O94810 467 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 CD1AP06126 327 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 CALCRP30988 508 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 GFRA1P56159 465 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 FOXF2Q12947 444 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 PDZK1IP1Q13113 114 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 RIPPLY2Q5TAB7 128 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 FDX2Q6P4F2 183 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 TFAP2EQ6VUC0 442 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 WDYHV1Q96HA8 205 aa13.18□□□□□ -0.3
MCF2L-205ENST00000397017 A0A0B4J293 547 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 IGKV1-9A0A0C4DH69 117 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 A0A1B0GUH1 482 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 TSPAN4O14817 238 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 TAS2R31P59538 309 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 RBM39Q14498 530 aaKnown RBP13.17□□□□□ -0.3
MCF2L-205ENST00000397017 AK3Q9UIJ7 227 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 TNRC18O15417 2968 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-205ENST00000397017 DEFB108AA8MXU0 73 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 RAC2P15153 192 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 RPS27AP62979 156 aaKnown RBP13.17□□□□□ -0.3
MCF2L-205ENST00000397017 C9orf106Q8NAJ2 232 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 USP34Q70CQ2 3546 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 P2RY4P51582 365 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 ADAD2Q8NCV1 583 aaKnown RBP13.17□□□□□ -0.3
MCF2L-205ENST00000397017 LYZL4Q96KX0 146 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 CA10Q9NS85 328 aa13.17□□□□□ -0.3
MCF2L-205ENST00000397017 A0A0U1RQV5 110 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 WISP2O76076 250 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 GNMTQ14749 295 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 ATPAF1Q5TC12 328 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-205ENST00000397017 FAM58AQ8N1B3 248 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 H1FXQ92522 213 aaKnown RBP13.16□□□□□ -0.3
MCF2L-205ENST00000397017 SERPINE3A8MV23 424 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 OR8U9P0C7N5 309 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 NDUFB7P17568 137 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 PTAFRP25105 342 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 CEBPDP49716 269 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-205ENST00000397017 CALHM1Q8IU99 346 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 OR8U1Q8NH10 309 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 PPP1R1CQ8WVI7 109 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 CMTM3Q96MX0 182 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 SLC17A5Q9NRA2 495 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 IGHV3-43A0A0B4J1X8 118 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 SULT1C2O00338 296 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 SYNGR3O43761 229 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 ONECUT2O95948 504 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 IGHV3-43DP0DP04 118 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 FSTP19883 344 aa13.16□□□□□ -0.3
MCF2L-205ENST00000397017 BHLHA15Q7RTS1 189 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms