RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 COMMD5Q9GZQ3 224 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 ANXA10Q9UJ72 324 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 PLPP3O14495 311 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 B4GALT1P15291 398 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 DLK1P80370 383 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 TMEM267Q0VDI3 215 aaPredicted RBP15.29■□□□□ 0.04
SIN3A-203ENST00000394949 TSEN54Q7Z6J9 526 aaKnown RBP15.29■□□□□ 0.04
SIN3A-203ENST00000394949 ZNF547Q8IVP9 402 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 TMEM104Q8NE00 496 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 SPACA9Q96E40 222 aaPredicted RBP15.29■□□□□ 0.04
SIN3A-203ENST00000394949 ATP5SQ99766 215 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 AMDHD2Q9Y303 409 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 MKRN2OSH3BPM6 223 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 CDK2AP1O14519 115 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 OR5G3P0C626 314 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 NSUN5P2Q63ZY6 315 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 ZNF660Q6AZW8 331 aaPredicted RBP15.29■□□□□ 0.04
SIN3A-203ENST00000394949 LIAT1Q6ZQX7 453 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 NHLRC2Q8NBF2 726 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 MOGAT1Q96PD6 335 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 FLRT3Q9NZU0 649 aa15.29■□□□□ 0.04
SIN3A-203ENST00000394949 GPR37O15354 613 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 SOX15O60248 233 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 TNFSF15O95150 251 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 GGTLC2Q14390 218 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 Q6ZS52 159 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 ZNF596Q8TC21 504 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 COX14Q96I36 57 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 PROCRQ9UNN8 238 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 TRIB1Q96RU8 372 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 FOXB1Q99853 325 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 SEC16AO15027 2179 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 DAOP14920 347 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 ARL16Q0P5N6 197 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 GPA33Q99795 319 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 OCIAD1Q9NX40 245 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 A0A1W2PNV4 684 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 FCN1O00602 326 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 DEFA4P12838 97 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 ZNF362Q5T0B9 420 aaPredicted RBP15.28■□□□□ 0.04
SIN3A-203ENST00000394949 C10orf35Q96D05 121 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 WNT16Q9UBV4 365 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 SCN1AP35498 2009 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 DSPPQ9NZW4 1301 aa15.28■□□□□ 0.04
SIN3A-203ENST00000394949 ZFC3H1O60293 1989 aaKnown RBP15.28■□□□□ 0.04
SIN3A-203ENST00000394949 PAPPAQ13219 1627 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 TMEM30CPA0ZSE6 113 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 DBX1A6NMT0 343 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 LINC01387J3KSC0 135 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 RER1O15258 196 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 HPP00738 406 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 CISD3P0C7P0 127 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 DSCR4P56555 118 aaPredicted RBP15.27■□□□□ 0.04
SIN3A-203ENST00000394949 TRA2AQ13595 282 aaKnown RBP eCLIP15.27■□□□□ 0.04
SIN3A-203ENST00000394949 OR11G2Q8NGC1 345 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 H3BQ15 152 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 CDS2O95674 445 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 NDUFB7P17568 137 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 CDC34P49427 236 aaPredicted RBP15.27■□□□□ 0.04
SIN3A-203ENST00000394949 DMWDQ09019 674 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 UBE2V2Q15819 145 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 MESTQ5EB52 335 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 ZNRF4Q8WWF5 429 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 TMEM147Q9BVK8 224 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 PRSS50Q9UI38 385 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 VAX2Q9UIW0 290 aa15.27■□□□□ 0.04
SIN3A-203ENST00000394949 TOX3O15405 576 aaPredicted RBP15.27■□□□□ 0.03
SIN3A-203ENST00000394949 INSM1Q01101 510 aaPredicted RBP15.27■□□□□ 0.03
SIN3A-203ENST00000394949 IGFBP7Q16270 282 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 HLA-BQ31612 363 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 PUSL1Q8N0Z8 303 aaKnown RBP15.27■□□□□ 0.03
SIN3A-203ENST00000394949 ARRDC1-AS1Q9H2J1 176 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 ZNF355PQ9NSJ1 428 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 SMCHD1A6NHR9 2005 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 TRAV8-7A0A075B6U6 113 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 OR5H15A6NDH6 313 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 OR5H1A6NKK0 313 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 GAPDHP04406 335 aaKnown RBP15.27■□□□□ 0.03
SIN3A-203ENST00000394949 HEXAP06865 529 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 MDH2P40926 338 aaKnown RBP15.27■□□□□ 0.03
SIN3A-203ENST00000394949 CSRP3P50461 194 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 PTTG1IPP53801 180 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 GNG3P63215 75 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 ZNF154Q13106 437 aa15.27■□□□□ 0.03
SIN3A-203ENST00000394949 NUFIP2Q7Z417 695 aaKnown RBP15.27■□□□□ 0.03
SIN3A-203ENST00000394949 ATG4DQ86TL0 474 aaPredicted RBP15.27■□□□□ 0.03
SIN3A-203ENST00000394949 FAM74A7A6NL05 159 aa15.26■□□□□ 0.03
SIN3A-203ENST00000394949 HOXC4P09017 264 aaPredicted RBP15.26■□□□□ 0.03
SIN3A-203ENST00000394949 HLA-GP17693 338 aa15.26■□□□□ 0.03
SIN3A-203ENST00000394949 USF1P22415 310 aaPredicted RBP15.26■□□□□ 0.03
SIN3A-203ENST00000394949 C20orf196Q8IYI0 205 aa15.26■□□□□ 0.03
SIN3A-203ENST00000394949 ANGPTL4Q9BY76 406 aa15.26■□□□□ 0.03
SIN3A-203ENST00000394949 SLC45A2Q9UMX9 530 aa15.26■□□□□ 0.03
SIN3A-203ENST00000394949 VSIG10L2P0DP72 767 aa15.26■□□□□ 0.03
SIN3A-203ENST00000394949 VDAC1P21796 283 aa15.26■□□□□ 0.03
SIN3A-203ENST00000394949 ZNF816Q0VGE8 651 aaPredicted RBP15.26■□□□□ 0.03
SIN3A-203ENST00000394949 CEACAM16Q2WEN9 425 aa15.26■□□□□ 0.03
SIN3A-203ENST00000394949 SCCPDHQ8NBX0 429 aa15.26■□□□□ 0.03
SIN3A-203ENST00000394949 OR10G4Q8NGN3 311 aa15.26■□□□□ 0.03
SIN3A-203ENST00000394949 OR10G9Q8NGN4 311 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms