RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ARPC4P59998 168 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 ERVS71-1P61550 626 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 FOXF2Q12947 444 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 ACTBL2Q562R1 376 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 VWA1Q6PCB0 445 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 CLEC18BQ6UXF7 455 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 TFAP2EQ6VUC0 442 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 C9orf106Q8NAJ2 232 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 SLC30A7Q8NEW0 376 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 GMPPAQ96IJ6 420 aaPredicted RBP12.95□□□□□ -0.34
GPC3-202ENST00000394299 PHB2Q99623 299 aa12.95□□□□□ -0.34
GPC3-202ENST00000394299 ZNF2Q9BSG1 426 aaPredicted RBP12.95□□□□□ -0.34
GPC3-202ENST00000394299 ARID1AO14497 2285 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 TRAV17A0A0B4J275 112 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 IGHV3-64DA0A0J9YX35 117 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 SYNGR1O43759 233 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 ADAP1O75689 374 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 CEACAM1P13688 526 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 TAS2R46P59540 309 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 TMEM128Q5BJH2 165 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 FAM209AQ5JX71 171 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 PPP1R1CQ8WVI7 109 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 CPNE2Q96FN4 548 aaPredicted RBP12.94□□□□□ -0.34
GPC3-202ENST00000394299 IRF2BPLQ9H1B7 796 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 RDH8Q9NYR8 311 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 MTCH1Q9NZJ7 389 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 LUZP4Q9P127 313 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 ANXA10Q9UJ72 324 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 ZNF175Q9Y473 711 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 BSNQ9UPA5 3926 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 RFPL4AA6NLU0 287 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 RFPL4AL1F8VTS6 287 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 K7EM74 188 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 DUS4LO95620 317 aaKnown RBP12.94□□□□□ -0.34
GPC3-202ENST00000394299 FCGR3AP08637 254 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 IDH3GP51553 393 aaPredicted RBP12.94□□□□□ -0.34
GPC3-202ENST00000394299 RBM11P57052 281 aaKnown RBP12.94□□□□□ -0.34
GPC3-202ENST00000394299 CEACAM21Q3KPI0 293 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 BEX5Q5H9J7 111 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 ZDHHC23Q8IYP9 409 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 HSF4Q9ULV5 492 aa12.94□□□□□ -0.34
GPC3-202ENST00000394299 TMA7Q9Y2S6 64 aaKnown RBP12.94□□□□□ -0.34
GPC3-202ENST00000394299 HMSDA8MTL9 139 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 HSPB6O14558 160 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 FPR2P25090 351 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 S100A11P31949 105 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 ANKRD55Q3KP44 614 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 PEG10Q86TG7 708 aaKnown RBP12.93□□□□□ -0.34
GPC3-202ENST00000394299 ZNF546Q86UE3 836 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 MFFQ9GZY8 342 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 MAP1BP46821 2468 aaKnown RBP12.93□□□□□ -0.34
GPC3-202ENST00000394299 C5orf51A6NDU8 294 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 CEACAM18A8MTB9 384 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 CDK2AP1O14519 115 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 AGFG2O95081 481 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 PDGFAP04085 211 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 PGAM2P15259 253 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 CA6P23280 308 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 SERPINF1P36955 418 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 KIR2DL2P43627 348 aaPredicted RBP12.93□□□□□ -0.34
GPC3-202ENST00000394299 ALKBH6Q3KRA9 238 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 FAHD2BQ6P2I3 314 aaPredicted RBP12.93□□□□□ -0.34
GPC3-202ENST00000394299 FAM214BQ7L5A3 538 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 TMEM17Q86X19 198 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 TMEM185AQ8NFB2 350 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 FAHD2AQ96GK7 314 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 IL36GQ9NZH8 169 aa12.93□□□□□ -0.34
GPC3-202ENST00000394299 SHANK1Q9Y566 2161 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 DBX1A6NMT0 343 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 CA11O75493 328 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 CST4P01036 141 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 CD8AP01732 235 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 OR5H8P0DN80 308 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 ARL6IP1Q15041 203 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 HAGHLQ6PII5 290 aaPredicted RBP12.92□□□□□ -0.34
GPC3-202ENST00000394299 IGF2-ASQ6U949 168 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 LRFN3Q9BTN0 628 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 ZNF442Q9H7R0 627 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 RPS10-NUDT3A0A1W2PQS6 291 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 ZNF891A8MT65 544 aaPredicted RBP12.92□□□□□ -0.34
GPC3-202ENST00000394299 PDCD6O75340 191 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 SFT2D2O95562 160 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 RPS2P15880 293 aaKnown RBP12.92□□□□□ -0.34
GPC3-202ENST00000394299 GMFBP60983 142 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 ZNF660Q6AZW8 331 aaPredicted RBP12.92□□□□□ -0.34
GPC3-202ENST00000394299 ZNF585AQ6P3V2 769 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 SLC22A25Q6T423 547 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 ALKAL2Q6UX46 152 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 C3P1Q6ZMU1 363 aa12.92□□□□□ -0.34
GPC3-202ENST00000394299 IFNA7P01567 189 aa12.91□□□□□ -0.34
GPC3-202ENST00000394299 ZNF14P17017 642 aaPredicted RBP12.91□□□□□ -0.34
GPC3-202ENST00000394299 NBL1P41271 181 aa12.91□□□□□ -0.34
GPC3-202ENST00000394299 C17orf78Q8N4C9 275 aa12.91□□□□□ -0.34
GPC3-202ENST00000394299 TOMM40LQ969M1 308 aa12.91□□□□□ -0.34
GPC3-202ENST00000394299 TECTBQ96PL2 329 aa12.91□□□□□ -0.34
GPC3-202ENST00000394299 OR2J1Q9GZK6 312 aa12.91□□□□□ -0.34
GPC3-202ENST00000394299 GP6Q9HCN6 339 aa12.91□□□□□ -0.34
GPC3-202ENST00000394299 UBQLN2Q9UHD9 624 aa12.91□□□□□ -0.34
GPC3-202ENST00000394299 LEUTXA8MZ59 168 aa12.91□□□□□ -0.34
GPC3-202ENST00000394299 RHBDL1O75783 438 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms