RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CYB5AP00167 134 aa25.23■■□□□ 1.63
CMTM4-202ENST00000394106 ETV1P50549 477 aa25.23■■□□□ 1.63
CMTM4-202ENST00000394106 GTF2A1P52655 376 aaPredicted RBP25.23■■□□□ 1.63
CMTM4-202ENST00000394106 OGFRL1Q5TC84 451 aaPredicted RBP25.23■■□□□ 1.63
CMTM4-202ENST00000394106 LHFPL2Q6ZUX7 228 aa25.23■■□□□ 1.63
CMTM4-202ENST00000394106 MKXQ8IYA7 352 aa25.23■■□□□ 1.63
CMTM4-202ENST00000394106 PIP4P2Q8N4L2 257 aa25.23■■□□□ 1.63
CMTM4-202ENST00000394106 OR4M1Q8NGD0 313 aa25.23■■□□□ 1.63
CMTM4-202ENST00000394106 EMG1Q92979 244 aaKnown RBP25.23■■□□□ 1.63
CMTM4-202ENST00000394106 RFT1Q96AA3 541 aa25.23■■□□□ 1.63
CMTM4-202ENST00000394106 SPSB1Q96BD6 273 aa25.23■■□□□ 1.63
CMTM4-202ENST00000394106 TRBV2A0A0J9YWF9 115 aa25.22■■□□□ 1.63
CMTM4-202ENST00000394106 IRGMA1A4Y4 181 aa25.22■■□□□ 1.63
CMTM4-202ENST00000394106 H0YAE9 185 aa25.22■■□□□ 1.63
CMTM4-202ENST00000394106 HKR1P10072 659 aa25.22■■□□□ 1.63
CMTM4-202ENST00000394106 DCKP27707 260 aa25.22■■□□□ 1.63
CMTM4-202ENST00000394106 RPL31P62899 125 aaKnown RBP25.22■■□□□ 1.63
CMTM4-202ENST00000394106 GUCA2AQ02747 115 aa25.22■■□□□ 1.63
CMTM4-202ENST00000394106 COL10A1Q03692 680 aa25.22■■□□□ 1.63
CMTM4-202ENST00000394106 METAP1DQ6UB28 335 aaPredicted RBP25.22■■□□□ 1.63
CMTM4-202ENST00000394106 C1orf122Q6ZSJ8 110 aa25.22■■□□□ 1.63
CMTM4-202ENST00000394106 ASCC1Q8N9N2 400 aaKnown RBP25.22■■□□□ 1.63
CMTM4-202ENST00000394106 TSEN15Q8WW01 171 aaKnown RBP25.22■■□□□ 1.63
CMTM4-202ENST00000394106 SPACA5Q96QH8 159 aa25.22■■□□□ 1.63
CMTM4-202ENST00000394106 METTL8Q9H825 291 aaKnown RBP25.22■■□□□ 1.63
CMTM4-202ENST00000394106 SPRY1O43609 319 aaPredicted RBP25.21■■□□□ 1.63
CMTM4-202ENST00000394106 TK1P04183 234 aa25.21■■□□□ 1.63
CMTM4-202ENST00000394106 MELTFP08582 738 aa25.21■■□□□ 1.63
CMTM4-202ENST00000394106 EEF1B2P24534 225 aaKnown RBP25.21■■□□□ 1.63
CMTM4-202ENST00000394106 C3orf56Q8N813 242 aa25.21■■□□□ 1.63
CMTM4-202ENST00000394106 HAVCR2Q8TDQ0 301 aa25.21■■□□□ 1.63
CMTM4-202ENST00000394106 ZCCHC4Q9H5U6 513 aa25.21■■□□□ 1.63
CMTM4-202ENST00000394106 RBFOX1Q9NWB1 397 aaKnown RBP25.21■■□□□ 1.63
CMTM4-202ENST00000394106 DHDHQ9UQ10 334 aa25.21■■□□□ 1.63
CMTM4-202ENST00000394106 CASQ2O14958 399 aaPredicted RBP25.2■■□□□ 1.62
CMTM4-202ENST00000394106 RPSAP08865 295 aaKnown RBP25.2■■□□□ 1.62
CMTM4-202ENST00000394106 BCL3P20749 454 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 CFPP27918 469 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 CAPGP40121 348 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 NPBWR2P48146 333 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 IL18R1Q13478 541 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 AWAT1Q58HT5 328 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 OR2G6Q5TZ20 316 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 C16orf87Q6PH81 154 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 TMPRSS11AQ6ZMR5 421 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 Q8IYB0 196 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 TNFRSF14Q92956 283 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 FAM234AQ9H0X4 552 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 CAB39Q9Y376 341 aaPredicted RBP25.2■■□□□ 1.62
CMTM4-202ENST00000394106 FAM96BQ9Y3D0 163 aa25.2■■□□□ 1.62
CMTM4-202ENST00000394106 CHRM2P08172 466 aa25.19■■□□□ 1.62
CMTM4-202ENST00000394106 CALCBP10092 127 aa25.19■■□□□ 1.62
CMTM4-202ENST00000394106 MYL12AP19105 171 aa25.19■■□□□ 1.62
CMTM4-202ENST00000394106 PDZK1IP1Q13113 114 aa25.19■■□□□ 1.62
CMTM4-202ENST00000394106 NCR3LG1Q68D85 454 aa25.19■■□□□ 1.62
CMTM4-202ENST00000394106 TMEM200BQ69YZ2 307 aa25.19■■□□□ 1.62
CMTM4-202ENST00000394106 PNKDQ8N490 385 aa25.19■■□□□ 1.62
CMTM4-202ENST00000394106 TAF15Q92804 592 aaKnown RBP eCLIP25.19■■□□□ 1.62
CMTM4-202ENST00000394106 IL36RNQ9UBH0 155 aa25.19■■□□□ 1.62
CMTM4-202ENST00000394106 DIMT1Q9UNQ2 313 aaKnown RBP25.19■■□□□ 1.62
CMTM4-202ENST00000394106 K7N7A8 449 aa25.18■■□□□ 1.62
CMTM4-202ENST00000394106 NPFFO15130 113 aa25.18■■□□□ 1.62
CMTM4-202ENST00000394106 ANGPTL7O43827 346 aa25.18■■□□□ 1.62
CMTM4-202ENST00000394106 GNAO1P09471 354 aa25.18■■□□□ 1.62
CMTM4-202ENST00000394106 PIPP12273 146 aaPredicted RBP25.18■■□□□ 1.62
CMTM4-202ENST00000394106 SNU13P55769 128 aaKnown RBP25.18■■□□□ 1.62
CMTM4-202ENST00000394106 FOXL1Q12952 345 aa25.18■■□□□ 1.62
CMTM4-202ENST00000394106 XAF1Q6GPH4 301 aa25.18■■□□□ 1.62
CMTM4-202ENST00000394106 FIP1L1Q6UN15 594 aaKnown RBP25.18■■□□□ 1.62
CMTM4-202ENST00000394106 RNF144BQ7Z419 303 aa25.18■■□□□ 1.62
CMTM4-202ENST00000394106 C8orf59Q8N0T1 100 aaPredicted RBP25.18■■□□□ 1.62
CMTM4-202ENST00000394106 FAM58AQ8N1B3 248 aa25.18■■□□□ 1.62
CMTM4-202ENST00000394106 OR5D18Q8NGL1 313 aa25.18■■□□□ 1.62
CMTM4-202ENST00000394106 NEK6Q9HC98 313 aa25.18■■□□□ 1.62
CMTM4-202ENST00000394106 EXOSC1Q9Y3B2 195 aaKnown RBP25.18■■□□□ 1.62
CMTM4-202ENST00000394106 A0A1W2PPH5 198 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 MT-ND2P03891 347 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 HCKP08631 526 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 PRKACAP17612 351 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 RPL22L1Q6P5R6 122 aaKnown RBP25.17■■□□□ 1.62
CMTM4-202ENST00000394106 SERPINA12Q8IW75 414 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 OR5D14Q8NGL3 314 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 OR5D13Q8NGL4 314 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 SSMEM1Q8WWF3 244 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 TMEM80Q96HE8 168 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 VCXQ9H320 206 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 UNKLQ9H9P5 680 aaKnown RBP25.17■■□□□ 1.62
CMTM4-202ENST00000394106 CLEC2DQ9UHP7 191 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 HSPE1-MOB4S4R3N1 261 aa25.17■■□□□ 1.62
CMTM4-202ENST00000394106 ANK2Q01484 3957 aa25.16■■□□□ 1.62
CMTM4-202ENST00000394106 HAND1O96004 215 aa25.16■■□□□ 1.62
CMTM4-202ENST00000394106 DUSP1P28562 367 aa25.16■■□□□ 1.62
CMTM4-202ENST00000394106 SOX2P48431 317 aa25.16■■□□□ 1.62
CMTM4-202ENST00000394106 PARP16Q8N5Y8 322 aa25.16■■□□□ 1.62
CMTM4-202ENST00000394106 CHIAQ9BZP6 476 aa25.16■■□□□ 1.62
CMTM4-202ENST00000394106 DCLRE1BQ9H816 532 aa25.16■■□□□ 1.62
CMTM4-202ENST00000394106 CHCHD3Q9NX63 227 aaKnown RBP25.16■■□□□ 1.62
CMTM4-202ENST00000394106 TENM1Q9UKZ4 2725 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 SULT1B1O43704 296 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 ZNF737O75373 536 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms