RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 TGIF2-C20orf24A0A0A6YYL0 155 aa14.41□□□□□ -0.1
SHANK1-204ENST00000391814 FBXL14Q8N1E6 418 aa14.41□□□□□ -0.1
SHANK1-204ENST00000391814 OR13H1Q8NG92 308 aa14.41□□□□□ -0.1
SHANK1-204ENST00000391814 AURKAIP1Q9NWT8 199 aaPredicted RBP14.41□□□□□ -0.1
SHANK1-204ENST00000391814 RBP4P02753 201 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 COMPP49747 757 aaPredicted RBP14.4□□□□□ -0.1
SHANK1-204ENST00000391814 VEGFBP49765 207 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 FMODQ06828 376 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 ERRFI1Q9UJM3 462 aaPredicted RBP14.4□□□□□ -0.1
SHANK1-204ENST00000391814 LRRC3CA6NJW4 275 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 G6PCP35575 357 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 RABEPKQ7Z6M1 372 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 LSRQ86X29 649 aaPredicted RBP14.4□□□□□ -0.1
SHANK1-204ENST00000391814 PUSL1Q8N0Z8 303 aaKnown RBP14.4□□□□□ -0.1
SHANK1-204ENST00000391814 OR8A1Q8NGG7 326 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 RAB24Q969Q5 203 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 TMEM230Q96A57 120 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 ICAM5Q9UMF0 924 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 SLC45A2Q9UMX9 530 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 IFITM10A6NMD0 228 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 NTN1O95631 604 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 D2HGDHQ8N465 521 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 OR1L4Q8NGR5 311 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 ADAT3Q96EY9 351 aaPredicted RBP14.4□□□□□ -0.1
SHANK1-204ENST00000391814 DDA1Q9BW61 102 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 TNFSF18Q9UNG2 199 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 VSIG4Q9Y279 399 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 KCNE1BA0A087WTH5 132 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 K7ERU9 68 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 SPATA46Q5T0L3 261 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 FRG2CA6NGY1 282 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 CBR3O75828 277 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 FUT3P21217 361 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 CCR2P41597 374 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 FUT7Q11130 342 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 IL24Q13007 206 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 DCAF12Q5T6F0 453 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 FAHD2BQ6P2I3 314 aaPredicted RBP14.4□□□□□ -0.1
SHANK1-204ENST00000391814 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.4□□□□□ -0.1
SHANK1-204ENST00000391814 FAHD2AQ96GK7 314 aa14.4□□□□□ -0.1
SHANK1-204ENST00000391814 MMP9P14780 707 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 CEBPDP49716 269 aaPredicted RBP14.39□□□□□ -0.11
SHANK1-204ENST00000391814 RRADP55042 308 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 TMEM147Q9BVK8 224 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 SNURFLB1AK76 121 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 PPICP45877 212 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 SCAND1P57086 179 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 FOXF1Q12946 379 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 C4orf45Q96LM5 186 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 TP53RKQ96S44 253 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 IGHEP01854 428 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 OPRK1P41145 380 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 TMEM255AQ5JRV8 349 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 DMKNQ6E0U4 476 aaPredicted RBP14.39□□□□□ -0.11
SHANK1-204ENST00000391814 LDLRAD3Q86YD5 345 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 RPS4Y2Q8TD47 263 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 BOD1Q96IK1 185 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 SP1P08047 785 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 STAG3L2P0CL84 134 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 NCBP2LA6PVI3 153 aaKnown RBP14.39□□□□□ -0.11
SHANK1-204ENST00000391814 H0Y8X5 98 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 PRSS1P07477 247 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 RHOBP62745 196 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 EWSR1Q01844 656 aaKnown RBP eCLIP14.39□□□□□ -0.11
SHANK1-204ENST00000391814 HLA-BQ31612 363 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 BAHD1Q8TBE0 780 aaPredicted RBP14.39□□□□□ -0.11
SHANK1-204ENST00000391814 DMRT1Q9Y5R6 373 aa14.39□□□□□ -0.11
SHANK1-204ENST00000391814 TRBV5-4A0A0C4DH59 114 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 GP1BAP07359 652 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 B4GALNT1Q00973 533 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 TCTN1Q2MV58 587 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 DCAF12L2Q5VW00 463 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 OR4C12Q96R67 309 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 PMS2P1A4D2B8 440 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 FCGR3BO75015 233 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 S100A4P26447 101 aaKnown RBP14.38□□□□□ -0.11
SHANK1-204ENST00000391814 FDX2Q6P4F2 183 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 PATE1Q8WXA2 126 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 ST8SIA1Q92185 356 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 MRPL24Q96A35 216 aaKnown RBP14.38□□□□□ -0.11
SHANK1-204ENST00000391814 GPR61Q9BZJ8 451 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 PLAC1Q9HBJ0 212 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 FGF21Q9NSA1 209 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 ZNF785A8K8V0 405 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 SRSF10O75494 262 aaKnown RBP14.38□□□□□ -0.11
SHANK1-204ENST00000391814 ANKRD34CP0C6C1 535 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 HLA-GP17693 338 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 ZNF345Q14585 488 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 IRF3Q14653 427 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 LEMD1Q68G75 181 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 CD300LDQ6UXZ3 194 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 HSPB8Q9UJY1 196 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 NPTNQ9Y639 398 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 CA2P00918 260 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 OR3A1P47881 315 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 GNG10P50151 68 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 DUSP2Q05923 314 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 PWWP2BQ6NUJ5 590 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 CXorf67Q86X51 503 aaPredicted RBP14.38□□□□□ -0.11
SHANK1-204ENST00000391814 OR2A5Q96R48 311 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms