RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 TTMPQ5BVD1 217 aa1.99□□□□□ -2.09
SNORA40.2-201ENST00000390847 SYT6Q5T7P8 510 aaPredicted RBP1.99□□□□□ -2.09
SNORA40.2-201ENST00000390847 ZNF470Q6ECI4 717 aa1.99□□□□□ -2.09
SNORA40.2-201ENST00000390847 SETD3Q86TU7 594 aaPredicted RBP1.99□□□□□ -2.09
SNORA40.2-201ENST00000390847 OR4A15Q8NGL6 344 aa1.99□□□□□ -2.09
SNORA40.2-201ENST00000390847 QKIQ96PU8 341 aaKnown RBP eCLIP1.99□□□□□ -2.09
SNORA40.2-201ENST00000390847 CHRNA10Q9GZZ6 450 aa1.99□□□□□ -2.09
SNORA40.2-201ENST00000390847 SLC38A1Q9H2H9 487 aa1.99□□□□□ -2.09
SNORA40.2-201ENST00000390847 ICOSQ9Y6W8 199 aa1.99□□□□□ -2.09
SNORA40.2-201ENST00000390847 KIAA1671Q9BY89 1806 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 ZNF878C9JN71 531 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 H3BQ85 93 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 GATCO43716 136 aaKnown RBP1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 SYNGR2O43760 224 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 IGHMP01871 453 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 LIPCP11150 499 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 ENDOGQ14249 297 aaKnown RBP1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 TOMM34Q15785 309 aaPredicted RBP1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 SSX1Q16384 188 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 TAL2Q16559 108 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 UGT2A3Q6UWM9 527 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 NELFCDQ8IXH7 590 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 LINC00337Q8N6G1 96 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 ZNF555Q8NEP9 628 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 TNFRSF14Q92956 283 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 TOP1MTQ969P6 601 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 CHID1Q9BWS9 393 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 BEX2Q9BXY8 128 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 ASB7Q9H672 318 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 SDHAF3Q9NRP4 125 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 DDIT4Q9NX09 232 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 AP3M1Q9Y2T2 418 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 V9GYY9 64 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 LTBP4Q8N2S1 1624 aa1.98□□□□□ -2.09
SNORA40.2-201ENST00000390847 AQRO60306 1485 aaKnown RBP eCLIP1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 BAZ1BQ9UIG0 1483 aaKnown RBP1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 IGKV1OR2-108A0A075B7D4 117 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 LOC389332A0A1B0GUA5 103 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 ANKRD20A5PA0PJZ0 165 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 GMNCA6NCL1 334 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 TVP23AA6NH52 213 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 K7ERS5 55 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 UPK1AO00322 258 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 AQP9O43315 295 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 CPSF4O95639 269 aaKnown RBP1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 RLN2P04090 185 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 STAG3L2P0CL84 134 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 MLNP12872 115 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 TGFBR2P37173 567 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 TMEM241Q24JQ0 296 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 LINC00303Q3SY05 128 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 ATP6AP1LQ52LC2 224 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 UBE2NLQ5JXB2 153 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 WDR59Q6PJI9 974 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 ZNF773Q6PK81 442 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 SMARCD3Q6STE5 483 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 ASCL4Q6XD76 172 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 LINC00596Q86U02 117 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 CA13Q8N1Q1 262 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 LY6G5BQ8NDX9 201 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 OR8S1Q8NH09 359 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 UBA3Q8TBC4 463 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 C2orf15Q8WU43 125 aaKnown RBP1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 RILPQ96NA2 401 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 BCL7BQ9BQE9 202 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 UTP23Q9BRU9 249 aaKnown RBP1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 GAL3ST2Q9H3Q3 398 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 WDR55Q9H6Y2 383 aaPredicted RBP1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 ZNF706Q9Y5V0 76 aaPredicted RBP1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 C2orf16Q68DN1 1984 aa1.97□□□□□ -2.09
SNORA40.2-201ENST00000390847 LEUTXA8MZ59 168 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 E7EQL1 145 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 J3QRE1 110 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 COX7A2P2O60397 106 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 SNAI1O95863 264 aaPredicted RBP1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 PTHLHP12272 177 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 TAC1P20366 129 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 IMPA1P29218 277 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 GPR4P46093 362 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 GZMMP51124 257 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 DYNC1I2Q13409 638 aaKnown RBP1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 KRTAP25-1Q3LHN0 102 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 ZNF404Q494X3 552 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 AMN1Q8IY45 258 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 CPNE9Q8IYJ1 553 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 EIF4E3Q8N5X7 224 aaKnown RBP1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 OR8A1Q8NGG7 326 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 OR2K2Q8NGT1 345 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 ZCCHC13Q8WW36 166 aaKnown RBP1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 YPEL4Q96NS1 127 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 SHCBP1LQ9BZQ2 653 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 TDRD3Q9H7E2 651 aaKnown RBP1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 ANKHQ9HCJ1 492 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 C12orf4Q9NQ89 552 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 ANXA10Q9UJ72 324 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 MMACHCQ9Y4U1 282 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 SSH2Q76I76 1423 aa1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 DHX57Q6P158 1386 aaKnown RBP1.96□□□□□ -2.1
SNORA40.2-201ENST00000390847 ZNF407Q9C0G0 2248 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms