RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 OR2J1Q9GZK6 312 aa13.5□□□□□ -0.25
BRF1-203ENST00000379937 METTL9Q9H1A3 318 aa13.5□□□□□ -0.25
BRF1-203ENST00000379937 ZNF703Q9H7S9 590 aaPredicted RBP13.5□□□□□ -0.25
BRF1-203ENST00000379937 GJE1A6NN92 205 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 TMEM14DPA8MWL7 114 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 PRAF2O60831 178 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 SCTP09683 121 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 CNR1P21554 472 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 ACP1P24666 158 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 FAM3AP98173 230 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 ECH1Q13011 328 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 C1orf100Q5SVJ3 147 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 SIGIRRQ6IA17 410 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 FDX2Q6P4F2 183 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 LYZL2Q7Z4W2 148 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 SLC38A6Q8IZM9 456 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 TMEM229BQ8NBD8 167 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 HSD17B11Q8NBQ5 300 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 SUN5Q8TC36 379 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 MRPL24Q96A35 216 aaKnown RBP13.49□□□□□ -0.25
BRF1-203ENST00000379937 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.49□□□□□ -0.251e-10■■□□□ 11.6
BRF1-203ENST00000379937 TINAGQ9UJW2 476 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 SPEF1Q9Y4P9 236 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 PLP2Q04941 152 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 SPINK9Q5DT21 86 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 DEGS2Q6QHC5 323 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 ZSCAN4Q8NAM6 433 aaPredicted RBP13.49□□□□□ -0.25
BRF1-203ENST00000379937 FOXRED1Q96CU9 486 aaPredicted RBP13.49□□□□□ -0.25
BRF1-203ENST00000379937 HIST1H2AAQ96QV6 131 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 K7EM74 188 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 CDIPTO14735 213 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 SOX15O60248 233 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 GIPP09681 153 aaPredicted RBP13.49□□□□□ -0.25
BRF1-203ENST00000379937 FOXF2Q12947 444 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 PRDX4Q13162 271 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 TUSC1Q2TAM9 212 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 FAM27BQ5VT28 67 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 LYG2Q86SG7 212 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 FAM173AQ9BQD7 235 aa13.49□□□□□ -0.25
BRF1-203ENST00000379937 CELSR1Q9NYQ6 3014 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 IGHV3-43A0A0B4J1X8 118 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 VAMP5O95183 116 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 HPP00738 406 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 OR5AC1P0C628 307 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 IGHV3-43DP0DP04 118 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 PRB3Q04118 309 aaPredicted RBP13.48□□□□□ -0.25
BRF1-203ENST00000379937 VWA1Q6PCB0 445 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 ZCCHC24Q8N2G6 241 aaKnown RBP13.48□□□□□ -0.25
BRF1-203ENST00000379937 ZBTB44Q8NCP5 570 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 DEFB108BQ8NET1 73 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 SDHAF2Q9NX18 166 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 KCNS2Q9ULS6 477 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 C14orf166Q9Y224 244 aaKnown RBP13.48□□□□□ -0.25
BRF1-203ENST00000379937 H0YL77 283 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 SP1P08047 785 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 CPT2P23786 658 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 ADH6P28332 368 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 FHITP49789 147 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 RPS27AP62979 156 aaKnown RBP13.48□□□□□ -0.25
BRF1-203ENST00000379937 MDP1Q86V88 176 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 CCDC28AQ8IWP9 274 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 BSCL2Q96G97 398 aaPredicted RBP13.48□□□□□ -0.25
BRF1-203ENST00000379937 OBP2BQ9NPH6 170 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 SPRR3Q9UBC9 169 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 TLN2Q9Y4G6 2542 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 CRYBG3Q68DQ2 2970 aa13.48□□□□□ -0.25
BRF1-203ENST00000379937 WNT9BO14905 357 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 KLK10O43240 276 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 SYNGR3O43761 229 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 LHX2P50458 406 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 CAV2P51636 162 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 EDDM3AQ14507 147 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 CHST5Q9GZS9 411 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 FOXD3Q9UJU5 478 aaPredicted RBP13.47□□□□□ -0.25
BRF1-203ENST00000379937 TRGV5A0A0B4J1U4 118 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 QRFPP83859 136 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 TRA2AQ13595 282 aaKnown RBP eCLIP13.47□□□□□ -0.25
BRF1-203ENST00000379937 FAM201AQ5SY85 155 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 ATRAIDQ6UW56 229 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 HDDC2Q7Z4H3 204 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 OR6S1Q8NH40 331 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 HAS2Q92819 552 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 TMEM230Q96A57 120 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 C20orf24Q9BUV8 137 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 SLC22A20A6NK97 555 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 H0YIZ8 118 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 LDLRAD4O15165 306 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 ATXN7O15265 892 aaPredicted RBP13.47□□□□□ -0.25
BRF1-203ENST00000379937 CRYZL1O95825 349 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 CD46P15529 392 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 GNRHRP30968 328 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 CLPPQ16740 277 aaPredicted RBP13.47□□□□□ -0.25
BRF1-203ENST00000379937 FAM209AQ5JX71 171 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 ZNF660Q6AZW8 331 aaPredicted RBP13.47□□□□□ -0.25
BRF1-203ENST00000379937 ZNF808Q8N4W9 903 aaPredicted RBP13.47□□□□□ -0.25
BRF1-203ENST00000379937 PLXNB1O43157 2135 aa13.47□□□□□ -0.25
BRF1-203ENST00000379937 MRPS34P82930 218 aaKnown RBP13.46□□□□□ -0.25
BRF1-203ENST00000379937 C17orf50Q8WW18 174 aa13.46□□□□□ -0.25
BRF1-203ENST00000379937 CPNE4Q96A23 557 aaPredicted RBP13.46□□□□□ -0.25
BRF1-203ENST00000379937 B3GNT2Q9NY97 397 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms