RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 C16orf97H3BN30 126 aa15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 KRASP01116 189 aa15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 RAG2P55895 527 aa15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 UBALD1Q8TB05 177 aa15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 TMEM56Q96MV1 263 aa15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 PARP12Q9H0J9 701 aaKnown RBP15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 TMEM74BQ9NUR3 256 aa15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 C3orf80F5H4A9 247 aa15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 RAB5CP51148 216 aa15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 MMP16P51512 607 aa15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 KRTCAP3Q53RY4 240 aa15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 ZBTB37Q5TC79 503 aa15.77■□□□□ 0.11
CLSTN1-202ENST00000377298 LOC285556D6RIA3 1793 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 PRSS44E7EML9 344 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 PGA3P0DJD8 388 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 P2RX3P56373 397 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 TOR2AQ5JU69 321 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 TMEM230Q96A57 120 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 PSG11Q9UQ72 335 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 ADAM20O43506 726 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 DXOO77932 396 aaKnown RBP15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 MVDP53602 400 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 OR5AP2Q8NGF4 316 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 SOX7Q9BT81 388 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 RCL1Q9Y2P8 373 aaKnown RBP15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 HS3ST3B1Q9Y662 390 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 UNC13CQ8NB66 2214 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 SH2D7A6NKC9 451 aaPredicted RBP15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 LIMK1P53667 647 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 PRRX1P54821 245 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 WDR89Q96FK6 387 aaPredicted RBP15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 PLPPR2Q96GM1 343 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 CT45A10P0DMU9 189 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 TAGLN2P37802 199 aaKnown RBP15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 GNG10P50151 68 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 UBE2G2P60604 165 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 SAT2Q96F10 170 aaPredicted RBP15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 DNAJC13O75165 2243 aa15.76■□□□□ 0.11
CLSTN1-202ENST00000377298 NME2P1O60361 137 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 TEX261Q6UWH6 196 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 LCN15Q6UWW0 184 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 C17orf107Q6ZR85 190 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 TMEM251Q8N6I4 163 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 BSCL2Q96G97 398 aaPredicted RBP15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 CHRNA10Q9GZZ6 450 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 U3KQ87 197 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 FLI1Q01543 452 aaPredicted RBP15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 ZNF385AQ96PM9 386 aaKnown RBP15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 AMMECR1Q9Y4X0 333 aaPredicted RBP15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 SCO1O75880 301 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 CELA2AP08217 269 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 ASAH2BP0C7U1 165 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 ADGRG7Q96K78 797 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 NKX6-2Q9C056 277 aaPredicted RBP15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 NKX2-8O15522 239 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 OR13C7P0DN81 318 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 CEACAM3P40198 252 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 HIKESHIQ53FT3 197 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 BTNL3Q6UXE8 466 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 KDF1Q8NAX2 398 aaPredicted RBP15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 PRSS27Q9BQR3 290 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 MS4A5Q9H3V2 200 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 MTCH1Q9NZJ7 389 aa15.75■□□□□ 0.11
CLSTN1-202ENST00000377298 KIR2DS2P43631 304 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 GPA33Q99795 319 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 PECRQ9BY49 303 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 ADRB1P08588 477 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 LSM11P83369 360 aaKnown RBP eCLIP15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 SP6Q3SY56 376 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 AARDQ4LEZ3 155 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 C1orf185Q5T7R7 199 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 LRRTM1Q86UE6 522 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 RAB18Q9NP72 206 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 SLC52A3Q9NQ40 469 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 MRPS18AQ9NVS2 196 aaKnown RBP15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 SPTA1P02549 2419 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 TUBAL3A6NHL2 446 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 J3QT63 122 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 CCL21O00585 134 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 OR3A1P47881 315 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 ZFP62Q8NB50 900 aaPredicted RBP15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 ANGPTL6Q8NI99 470 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 RNF24Q9Y225 148 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 OR7C2O60412 319 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 FCGR3BO75015 233 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 SFT2D2O95562 160 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 IGLV3-19P01714 112 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 ZNF883P0CG24 379 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 C1orf174Q8IYL3 243 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 SMCO4Q9NRQ5 59 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 GNG13Q9P2W3 67 aa15.74■□□□□ 0.11
CLSTN1-202ENST00000377298 DEFB108AA8MXU0 73 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 HOXD11P31277 338 aaPredicted RBP15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 H3F3CQ6NXT2 135 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 SAP30LQ9HAJ7 183 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 MRPS18BQ9Y676 258 aaKnown RBP15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 AANATQ16613 207 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 FAM27BQ5VT28 67 aa15.73■□□□□ 0.11
CLSTN1-202ENST00000377298 MRGPRDQ8TDS7 321 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms