RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 SCARF2Q96GP6 870 aaPredicted RBP12.02□□□□□ -0.49
C9orf47-203ENST00000375851 GAB2Q9UQC2 676 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 NDUFB3O43676 98 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 OR5G3P0C626 314 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 TMIGD3P0DMS9 266 aaPredicted RBP12.02□□□□□ -0.49
C9orf47-203ENST00000375851 SPINK2P20155 84 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 CALCRP30988 508 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 STARD6P59095 220 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 NANOS3P60323 173 aaKnown RBP12.02□□□□□ -0.49
C9orf47-203ENST00000375851 PMP22Q01453 160 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 RAB32Q13637 225 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 ACOT6Q3I5F7 207 aaPredicted RBP12.02□□□□□ -0.49
C9orf47-203ENST00000375851 PXDC1Q5TGL8 231 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 TRMT61AQ96FX7 289 aaKnown RBP12.02□□□□□ -0.49
C9orf47-203ENST00000375851 ST6GALNAC2Q9UJ37 374 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 ZNF79Q15937 498 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 FAM122CQ6P4D5 195 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 RXFP4Q8TDU9 374 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 PECRQ9BY49 303 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 ESRP2Q9H6T0 727 aaKnown RBP12.02□□□□□ -0.49
C9orf47-203ENST00000375851 GPR35Q9HC97 309 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 QPCTLQ9NXS2 382 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 KCNE5Q9UJ90 142 aa12.02□□□□□ -0.49
C9orf47-203ENST00000375851 BRCA1P38398 1863 aaKnown RBP12.01□□□□□ -0.49
C9orf47-203ENST00000375851 A0A0J9YW62 118 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 MBP02144 154 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 PGA3P0DJD8 388 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 HABP2Q14520 560 aaPredicted RBP12.01□□□□□ -0.49
C9orf47-203ENST00000375851 TMEM108Q6UXF1 575 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 OR2M7Q8NG81 312 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 OR4F5Q8NH21 305 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 OR6S1Q8NH40 331 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 LRRC29Q8WV35 223 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 OR4F4Q96R69 305 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 GLRX2Q9NS18 164 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 RPUSD4Q96CM3 377 aaKnown RBP12.01□□□□□ -0.49
C9orf47-203ENST00000375851 TUBG2Q9NRH3 451 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 RASL12Q9NYN1 266 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 OSGIN2Q9Y236 505 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 MPC2O95563 127 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 CELA2AP08217 269 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 OR10J4P0C629 311 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 MPPED2Q15777 294 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 LRRC10Q5BKY1 277 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 CLLU1Q5K131 121 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 DNASE2BQ8WZ79 361 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 CACFD1Q9UGQ2 172 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 ANXA10Q9UJ72 324 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 KLHDC2Q9Y2U9 406 aa12.01□□□□□ -0.49
C9orf47-203ENST00000375851 DEFB108AA8MXU0 73 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 RAB4AP20338 218 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 DTYMKP23919 212 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 NDUFA6P56556 154 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 ZNF239Q16600 458 aaKnown RBP12□□□□□ -0.49
C9orf47-203ENST00000375851 C10orf35Q96D05 121 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 ST6GAL2Q96JF0 529 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 OR2H1Q9GZK4 316 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 NAA60Q9H7X0 242 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 TMEM38BQ9NVV0 291 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 ATPIF1Q9UII2 106 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 OR7C2O60412 319 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 ONECUT2O95948 504 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 CYC1P08574 325 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 GABRA1P14867 456 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 CSF2RBP32927 897 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 KLF3P57682 345 aaPredicted RBP12□□□□□ -0.49
C9orf47-203ENST00000375851 TAS2R45P59539 299 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 HLXQ14774 488 aaPredicted RBP12□□□□□ -0.49
C9orf47-203ENST00000375851 GGNBP1Q5YKI7 109 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 APOBEC4Q8WW27 367 aaKnown RBP12□□□□□ -0.49
C9orf47-203ENST00000375851 LSM2Q9Y333 95 aaKnown RBP12□□□□□ -0.49
C9orf47-203ENST00000375851 OR2C1O95371 312 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 TPPP3Q9BW30 176 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 PSG11Q9UQ72 335 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 SCN2AQ99250 2005 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 TO15178 435 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 ADAP1O75689 374 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 CST4P01036 141 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 OR5AC1P0C628 307 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 VSIG8P0DPA2 414 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 TAGLNQ01995 201 aaKnown RBP12□□□□□ -0.49
C9orf47-203ENST00000375851 GGTLC2Q14390 218 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 INPP5JQ15735 1006 aaPredicted RBP12□□□□□ -0.49
C9orf47-203ENST00000375851 CTHRC1Q96CG8 243 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 DSPPQ9NZW4 1301 aa12□□□□□ -0.49
C9orf47-203ENST00000375851 C3orf85A0A1B0GTC6 90 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 PPP5D1E7EU14 171 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 K7EQM0 130 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 PPP1R2P9O14990 202 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 ADAM20O43506 726 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 MPGP29372 298 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 KCNJ3P48549 501 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 KIAA0141Q14154 515 aaPredicted RBP11.99□□□□□ -0.49
C9orf47-203ENST00000375851 HIST2H3AQ71DI3 136 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 RFLNBQ8N5W9 214 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 ADAT3Q96EY9 351 aaPredicted RBP11.99□□□□□ -0.49
C9orf47-203ENST00000375851 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 TMEM11P17152 192 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 OR3A1P47881 315 aa11.99□□□□□ -0.49
C9orf47-203ENST00000375851 ASCL1P50553 236 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms