RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 TLNRD1Q9H1K6 362 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 CA10Q9NS85 328 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 HSF4Q9ULV5 492 aa13.32□□□□□ -0.28
NIPAL3-204ENST00000374399 A0A1B0GUH1 482 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 TMEM210A6NLX4 147 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 CDIPTO14735 213 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 SIAH2O43255 324 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 CD3DP04234 171 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 CSF1P09603 554 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 RBMXP38159 391 aaKnown RBP13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 BCAP31P51572 246 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 KLF3P57682 345 aaPredicted RBP13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 AP3S2P59780 193 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 TLE1Q04724 770 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 SPRNQ5BIV9 151 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 NCMAPQ5T1S8 102 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 SFRP4Q6FHJ7 346 aaPredicted RBP13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 TMEM229BQ8NBD8 167 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 OR4S1Q8NGB4 309 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 OR13G1Q8NGZ3 307 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 SNAPC3Q92966 411 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 FBXW5Q969U6 566 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 SULT4A1Q9BR01 284 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 MARVELD1Q9BSK0 173 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 CXXC4Q9H2H0 198 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 EPG5Q9HCE0 2579 aa13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 ANKHD1Q8IWZ3 2542 aaKnown RBP13.31□□□□□ -0.28
NIPAL3-204ENST00000374399 SHISA9B4DS77 424 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 TRAPPC2LH3BP13 241 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 PTBP3O95758 552 aaKnown RBP13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 CD74P04233 296 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 PGA5P0DJD9 388 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 ACTBP60709 375 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 ACTG1P63261 375 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 HOXA4Q00056 320 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 MPPED2Q15777 294 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 BRICD5Q6PL45 260 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 CA5BP1Q8WTZ4 195 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 MRPL24Q96A35 216 aaKnown RBP13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 POM121Q96HA1 1249 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 FAAP24Q9BTP7 215 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 CACNG6Q9BXT2 260 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 TAS2R8Q9NYW2 309 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 ZNF107Q9UII5 783 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 SERPINE3A8MV23 424 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 CA11O75493 328 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 GRPP07492 148 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 ZNF735P0CB33 412 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 NAT1P18440 290 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 GNG2P59768 71 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 RPS23P62266 143 aaKnown RBP13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 C4orf17Q53FE4 359 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 NKAPLQ5M9Q1 402 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 PRAMEF6Q5VXH4 476 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 OR52W1Q6IF63 320 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 ADAM5Q6NVV9 412 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 Q6ZPA2 131 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 ZNF826PQ6ZT77 177 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 DEDD2Q8WXF8 326 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 EMG1Q92979 244 aaKnown RBP13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 NRIP2Q9BQI9 281 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 OCSTAMPQ9BR26 566 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 HDHD3Q9BSH5 251 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 TINAGL1Q9GZM7 467 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 ZNF442Q9H7R0 627 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 PCDHB16Q9NRJ7 776 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 PLEKHJ1Q9NW61 149 aa13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 RCC2Q9P258 522 aaKnown RBP13.3□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A10PA6NDY2 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A18PA6NE21 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A16PA6NEW6 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 NAP1L6A6NFF2 107 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A20PA6NIJ5 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A8PA6NJQ4 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A7PA6NKC0 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 CENPXA8MT69 81 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A22PA8MWA6 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A12PA8MX19 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A5PA8MXJ8 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A23PA8MXZ1 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 CYB5AP00167 134 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 TCRBP04435 133 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 ACAA1P09110 424 aaPredicted RBP13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A15PP0C7V4 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A13PP0C7W8 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A14PP0C7W9 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM90A24PP0C7X0 464 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 AKAIN1P0CW23 69 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 HLA-DMAP28067 261 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 RCVRNP35243 200 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 SNU13P55769 128 aaKnown RBP13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 SORDQ00796 357 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 ADIPOQQ15848 244 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 STEAP1BQ6NZ63 245 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 SLC22A25Q6T423 547 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 PLET1Q6UQ28 207 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 FAM58AQ8N1B3 248 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 DYRK2Q92630 601 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 DPAGT1Q9H3H5 408 aa13.29□□□□□ -0.28
NIPAL3-204ENST00000374399 HES4Q9HCC6 221 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms