RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 LIN54Q6MZP7 749 aa16.8■□□□□ 0.28
HDAC1-201ENST00000373548 INO80CQ6PI98 192 aaPredicted RBP16.8■□□□□ 0.28
HDAC1-201ENST00000373548 ZNF767PQ75MW2 155 aa16.8■□□□□ 0.28
HDAC1-201ENST00000373548 TMEM200AQ86VY9 491 aa16.8■□□□□ 0.28
HDAC1-201ENST00000373548 RBMXL3Q8N7X1 1067 aaKnown RBP16.8■□□□□ 0.28
HDAC1-201ENST00000373548 TMEM185AQ8NFB2 350 aa16.8■□□□□ 0.28
HDAC1-201ENST00000373548 TMEM230Q96A57 120 aa16.8■□□□□ 0.28
HDAC1-201ENST00000373548 HIST1H2AAQ96QV6 131 aa16.8■□□□□ 0.28
HDAC1-201ENST00000373548 ANXA10Q9UJ72 324 aa16.8■□□□□ 0.28
HDAC1-201ENST00000373548 MPC1Q9Y5U8 109 aa16.8■□□□□ 0.28
HDAC1-201ENST00000373548 OR5H14A6NHG9 310 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 F8VVB4 439 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 F8VWA3 439 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 J3QW42 95 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 SMPD2O60906 423 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 CXCL2P19875 107 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 OPRM1P35372 400 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 BAMBIQ13145 260 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 ELP2Q6IA86 826 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 ELMOD3Q96FG2 381 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 POM121Q96HA1 1249 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 CDH20Q9HBT6 801 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 MTCH1Q9NZJ7 389 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 SPTBN2O15020 2390 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 DUS4LO95620 317 aaKnown RBP16.79■□□□□ 0.28
HDAC1-201ENST00000373548 TMEM128Q5BJH2 165 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 FBXW12Q6X9E4 464 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 SEM1Q6ZVN7 128 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 OR8H1Q8NGG4 311 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 LILRB4Q8NHJ6 448 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 CASTOR1Q8WTX7 329 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 HS3ST6Q96QI5 342 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 PHB2Q99623 299 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 RTBDNQ9BSG5 229 aaPredicted RBP16.79■□□□□ 0.28
HDAC1-201ENST00000373548 PLSCR4Q9NRQ2 329 aa16.79■□□□□ 0.28
HDAC1-201ENST00000373548 CCSO14618 274 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 TNFSF13O75888 250 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 OR7C1O76099 320 aaPredicted RBP16.78■□□□□ 0.28
HDAC1-201ENST00000373548 HOXB1P14653 301 aaPredicted RBP16.78■□□□□ 0.28
HDAC1-201ENST00000373548 PPP3CBP16298 524 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 HLA-GP17693 338 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 PI3P19957 117 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 SPINK2P20155 84 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 FUT3P21217 361 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 NFYAP23511 347 aaPredicted RBP16.78■□□□□ 0.28
HDAC1-201ENST00000373548 EIF2S3P41091 472 aaKnown RBP16.78■□□□□ 0.28
HDAC1-201ENST00000373548 ARPC4P59998 168 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 FGF12P61328 243 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 PPP1CBP62140 327 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 SRSF4Q08170 494 aaKnown RBP16.78■□□□□ 0.28
HDAC1-201ENST00000373548 MRPL49Q13405 166 aaKnown RBP16.78■□□□□ 0.28
HDAC1-201ENST00000373548 GRK1Q15835 563 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 LPCAT3Q6P1A2 487 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 WDR31Q8NA23 367 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 BOD1Q96IK1 185 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 SCGB3A2Q96PL1 93 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 LHX6Q9UPM6 363 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 FAM221AA4D161 298 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 MCRIP1C9JLW8 97 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 SYNGR1O43759 233 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 SLC34A2O95436 690 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 MPC2O95563 127 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 TEX261Q6UWH6 196 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 C1orf162Q8NEQ5 155 aaPredicted RBP16.78■□□□□ 0.28
HDAC1-201ENST00000373548 CCDC120Q96HB5 630 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 U3KQ87 197 aa16.78■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A10PA6NDY2 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 MBD3L4A6NDZ8 208 aaPredicted RBP16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A18PA6NE21 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 MBD3L3A6NE82 208 aaPredicted RBP16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A16PA6NEW6 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A20PA6NIJ5 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 MBD3L5A6NJ08 208 aaPredicted RBP16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A8PA6NJQ4 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A7PA6NKC0 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 OR5B21A6NL26 309 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A22PA8MWA6 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A12PA8MX19 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A5PA8MXJ8 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A23PA8MXZ1 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A15PP0C7V4 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A13PP0C7W8 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A14PP0C7W9 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 FAM90A24PP0C7X0 464 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 CA6P23280 308 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 ERVS71-1P61550 626 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 SEC61A1P61619 476 aaKnown RBP16.77■□□□□ 0.28
HDAC1-201ENST00000373548 SORDQ00796 357 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 MKXQ8IYA7 352 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 MBD3L2Q8NHZ7 208 aaPredicted RBP16.77■□□□□ 0.28
HDAC1-201ENST00000373548 OR2J1Q9GZK6 312 aa16.77■□□□□ 0.28
HDAC1-201ENST00000373548 HMSDA8MTL9 139 aa16.76■□□□□ 0.27
HDAC1-201ENST00000373548 CGAP01215 116 aa16.76■□□□□ 0.27
HDAC1-201ENST00000373548 CD8AP01732 235 aa16.76■□□□□ 0.27
HDAC1-201ENST00000373548 CBR1P16152 277 aa16.76■□□□□ 0.27
HDAC1-201ENST00000373548 PMELP40967 661 aa16.76■□□□□ 0.27
HDAC1-201ENST00000373548 HTR2BP41595 481 aa16.76■□□□□ 0.27
HDAC1-201ENST00000373548 GNG3P63215 75 aa16.76■□□□□ 0.27
HDAC1-201ENST00000373548 NHLRC3Q5JS37 347 aa16.76■□□□□ 0.27
HDAC1-201ENST00000373548 ZNF660Q6AZW8 331 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms