RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 TMEM230Q96A57 120 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 FAM122AQ96E09 287 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 FAM103A1Q9BTL3 118 aaKnown RBP10.15□□□□□ -0.78
PTPRF-203ENST00000372407 UCK1Q9HA47 277 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 HES4Q9HCC6 221 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 MBD1Q9UIS9 605 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-203ENST00000372407 ADAP1O75689 374 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 MPZL1O95297 269 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 FCER1GP30273 86 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 OR3A4PP47883 348 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-203ENST00000372407 SUMO1P63165 101 aaKnown RBP10.15□□□□□ -0.78
PTPRF-203ENST00000372407 C17orf78Q8N4C9 275 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 OR4D9Q8NGE8 314 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 OR6X1Q8NH79 312 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 TMEM37Q8WXS4 190 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 PLA2G2FQ9BZM2 168 aa10.15□□□□□ -0.78
PTPRF-203ENST00000372407 BARX1Q9HBU1 254 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-203ENST00000372407 EP400Q96L91 3159 aa10.15□□□□□ -0.79
PTPRF-203ENST00000372407 C3orf85A0A1B0GTC6 90 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 ASCL1P50553 236 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 ATG4DQ86TL0 474 aaPredicted RBP10.14□□□□□ -0.79
PTPRF-203ENST00000372407 OR13G1Q8NGZ3 307 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 RFESDQ8TAC1 157 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 NUBPLQ8TB37 319 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 ACY3Q96HD9 319 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 ZNF426Q9BUY5 554 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 LOC285556D6RIA3 1793 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 MAP1LC3B2A6NCE7 125 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 FAM24AA6NFZ4 105 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 CXCL3P19876 107 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 SRD5A2P31213 254 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 SLC38A11Q08AI6 406 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 ETFDHQ16134 617 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 DEFB109BQ30KR1 87 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 C1QL3Q5VWW1 255 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 RHBDD2Q6NTF9 364 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 TMEM92Q6UXU6 159 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 M1APQ8TC57 530 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 GABRG3Q99928 467 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 MAP1LC3BQ9GZQ8 125 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 ICAM5Q9UMF0 924 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 FAM96BQ9Y3D0 163 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 RGS13O14921 159 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 INHBBP09529 407 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 CEACAM6P40199 344 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 PPP1CAP62136 330 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 EIF3IQ13347 325 aaKnown RBP10.14□□□□□ -0.79
PTPRF-203ENST00000372407 CD226Q15762 336 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 TMEM241Q24JQ0 296 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 SLC36A1Q7Z2H8 476 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 FAM24BQ8N5W8 94 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 PLPPR2Q96GM1 343 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 TMPRSS13Q9BYE2 586 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 ARRDC1-AS1Q9H2J1 176 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 FOCADQ5VW36 1801 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 OR5H15A6NDH6 313 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 SLC31A2O15432 143 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 MMP7P09237 267 aaPredicted RBP10.14□□□□□ -0.79
PTPRF-203ENST00000372407 OR5AC1P0C628 307 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 COL9A1P20849 921 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 TMEM33P57088 247 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 KRTDAPP60985 99 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 ZNRF4Q8WWF5 429 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 WDR13Q9H1Z4 485 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 FRRS1LQ9P0K9 344 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 OPN4Q9UHM6 478 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 YTHDF2Q9Y5A9 579 aaKnown RBP10.14□□□□□ -0.79
PTPRF-203ENST00000372407 POMT1Q9Y6A1 747 aa10.14□□□□□ -0.79
PTPRF-203ENST00000372407 OR5B21A6NL26 309 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 CRHP06850 196 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 CTSDP07339 412 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-203ENST00000372407 CA6P23280 308 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 LPAR6P43657 344 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 SELENOPP49908 381 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 RAC3P60763 192 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 IGFBP7Q16270 282 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 VMA21Q3ZAQ7 101 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 B3GNTL1Q67FW5 361 aaPredicted RBP10.13□□□□□ -0.79
PTPRF-203ENST00000372407 OR10D3Q8NH80 312 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 TMEM56Q96MV1 263 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 NARFLQ9H6Q4 476 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 IFT22Q9H7X7 185 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 CACNG5Q9UF02 275 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 ANXA10Q9UJ72 324 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 NEU3Q9UQ49 428 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 SPTBP11277 2137 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 SCN10AQ9Y5Y9 1956 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 HPXP02790 462 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 TPPP2P59282 170 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
PTPRF-203ENST00000372407 PAX5Q02548 391 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 MICBQ29980 383 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 IER2Q9BTL4 223 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 MFRPQ9BY79 579 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 ARL2-SNX15V9GYD0 113 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 A0A1W2PQD3 144 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 LSM6P62312 80 aaKnown RBP10.13□□□□□ -0.79
PTPRF-203ENST00000372407 FAM3AP98173 230 aa10.13□□□□□ -0.79
PTPRF-203ENST00000372407 INPP5JQ15735 1006 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms