RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 UNKLQ9H9P5 680 aaKnown RBP7.41□□□□□ -1.22
PTPRK-206ENST00000368215 RCL1Q9Y2P8 373 aaKnown RBP7.41□□□□□ -1.22
PTPRK-206ENST00000368215 CLDN16Q9Y5I7 305 aa7.41□□□□□ -1.22
PTPRK-206ENST00000368215 SHISA7A6NL88 538 aa7.41□□□□□ -1.22
PTPRK-206ENST00000368215 FIGNL2A6NMB9 653 aa7.41□□□□□ -1.22
PTPRK-206ENST00000368215 VSTM5A8MXK1 200 aa7.41□□□□□ -1.22
PTPRK-206ENST00000368215 TAAR5O14804 337 aa7.41□□□□□ -1.22
PTPRK-206ENST00000368215 LYZL6O75951 148 aa7.41□□□□□ -1.22
PTPRK-206ENST00000368215 IAPPP10997 89 aa7.41□□□□□ -1.22
PTPRK-206ENST00000368215 IRF2P14316 349 aa7.41□□□□□ -1.22
PTPRK-206ENST00000368215 ZFP62Q8NB50 900 aaPredicted RBP7.41□□□□□ -1.22
PTPRK-206ENST00000368215 MUCL1Q96DR8 90 aa7.41□□□□□ -1.22
PTPRK-206ENST00000368215 ALX4Q9H161 411 aaPredicted RBP7.41□□□□□ -1.22
PTPRK-206ENST00000368215 TTC28Q96AY4 2481 aa7.41□□□□□ -1.22
PTPRK-206ENST00000368215 DOCK7Q96N67 2140 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 PIGBOS1A0A0B4J2F0 54 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 NPIPB7O75200 414 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 IFNA1P01562 189 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 PDZK1IP1Q13113 114 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 ZNF468Q5VIY5 522 aaPredicted RBP7.4□□□□□ -1.22
PTPRK-206ENST00000368215 OR14K1Q8NGZ2 314 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 C2CD4CQ8TF44 421 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 MRPL24Q96A35 216 aaKnown RBP7.4□□□□□ -1.22
PTPRK-206ENST00000368215 PTX4Q96A99 478 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 HES7Q9BYE0 225 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 SRXN1Q9BYN0 137 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 NPDC1Q9NQX5 325 aaPredicted RBP7.4□□□□□ -1.22
PTPRK-206ENST00000368215 FZR1Q9UM11 496 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 COL4A4P53420 1690 aaPredicted RBP7.4□□□□□ -1.22
PTPRK-206ENST00000368215 TRAV39A0A0B4J263 110 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 A0A1W2PNV4 684 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 ATG12O94817 140 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 IGHMP01871 453 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 NMBP08949 121 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 CST2P09228 141 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 CBR1P16152 277 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 PSG4Q00888 419 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 UNC119Q13432 240 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 ZNF766Q5HY98 468 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 FAM27BQ5VT28 67 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 PRSS54Q6PEW0 395 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 OR1J1Q8NGS3 322 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 IP6K3Q96PC2 410 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 RHOFQ9HBH0 211 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 CHCHD2Q9Y6H1 151 aaPredicted RBP7.4□□□□□ -1.22
PTPRK-206ENST00000368215 B3GALNT1O75752 331 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 WISP1O95388 367 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 HAGHQ16775 308 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 ALKBH6Q3KRA9 238 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 DMBX1Q8NFW5 382 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 OR10Z1Q8NGY1 313 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 AQP3Q92482 292 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 RBMXL1Q96E39 390 aaKnown RBP7.4□□□□□ -1.22
PTPRK-206ENST00000368215 PLEKHA2Q9HB19 425 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 FBXL17Q9UF56 701 aa7.4□□□□□ -1.22
PTPRK-206ENST00000368215 THADAQ6YHU6 1953 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 LRRK1Q38SD2 2015 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 TICRRQ7Z2Z1 1910 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 RPS10-NUDT3A0A1W2PQS6 291 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 RPS10P46783 165 aaKnown RBP7.4□□□□□ -1.23
PTPRK-206ENST00000368215 ELLP55199 621 aaPredicted RBP7.4□□□□□ -1.23
PTPRK-206ENST00000368215 ERVK-16P61578 105 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 CATR1Q13166 79 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 UBE2V2Q15819 145 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 SPANXN5Q5MJ07 72 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 FAHD2BQ6P2I3 314 aaPredicted RBP7.4□□□□□ -1.23
PTPRK-206ENST00000368215 C1QL2Q7Z5L3 287 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 OR8U1Q8NH10 309 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 ZNF837Q96EG3 531 aaPredicted RBP7.4□□□□□ -1.23
PTPRK-206ENST00000368215 C14orf79Q96F83 325 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 FAHD2AQ96GK7 314 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 PLEKHF2Q9H8W4 249 aa7.4□□□□□ -1.23
PTPRK-206ENST00000368215 TMEM265A0A087WTH1 108 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 ZFP92A6NM28 416 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 CTXN2P0C2S0 81 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 RFPL3SP0C7P2 107 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 CALCRP30988 508 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 HOXD11P31277 338 aaPredicted RBP7.39□□□□□ -1.23
PTPRK-206ENST00000368215 UBE2KP61086 200 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 ZNF92Q03936 586 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 MSMO1Q15800 293 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 TUSC1Q2TAM9 212 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 DEFB124Q8NES8 71 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 OR2M7Q8NG81 312 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 OR13G1Q8NGZ3 307 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 TCTEX1D2Q8WW35 142 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 ZNF524Q96C55 264 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 PLK3Q9H4B4 646 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 NAA60Q9H7X0 242 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 BIN3Q9NQY0 253 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 SLC7A10Q9NS82 523 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 ERRFI1Q9UJM3 462 aaPredicted RBP7.39□□□□□ -1.23
PTPRK-206ENST00000368215 POLDIP2Q9Y2S7 368 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 K7ESF4 209 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 AADACP22760 399 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 ZBTB25P24278 435 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 GNG3P63215 75 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 HIKESHIQ53FT3 197 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 DCAF10Q5QP82 559 aa7.39□□□□□ -1.23
PTPRK-206ENST00000368215 ZNF660Q6AZW8 331 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms