RNA–Protein interactions for RNA: ENST00000363904.1

RNU6-478P-201, Transcript of RNA, U6 small nuclear 478, pseudogene, humanhuman

BASIC

Gene RNU6-478P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-478P-201ENST00000363904 ADPGKQ9BRR6 497 aa-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 NXF5Q9H1B4 397 aaKnown RBP-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 PIGUQ9H490 435 aa-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 COPS7BQ9H9Q2 264 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 PFDN4Q9NQP4 134 aa-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 ACER3Q9NUN7 267 aa-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 RBM22Q9NW64 420 aaKnown RBP eCLIP-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 MED29Q9NX70 200 aa-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 HHLA3Q9XRX5 114 aa-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 TDRKHQ9Y2W6 561 aaKnown RBP-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 RP1P56715 2156 aa-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 SMARCA4P51532 1647 aa-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 ZNF638Q14966 1978 aaKnown RBP-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 ITPR1Q14643 2758 aa-1.81□□□□□ -2.7
RNU6-478P-201ENST00000363904 BCL9O00512 1426 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 PRKDCP78527 4128 aaKnown RBP-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 ADAMTSL3P82987 1691 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 CCL15-CCL14A0A0B4J2E2 113 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 LOC100653049A0A140TA62 436 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 PDZK1P1A8MUH7 402 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 C9JQL5 133 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 M0R2T5 61 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 SLC17A3O00476 420 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 NDC80O14777 642 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 SLC30A4O14863 429 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 IFIT3O14879 490 aaKnown RBP-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 MAGEB3O15480 346 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 SLC37A4O43826 429 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 CTNSO60931 367 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 KERAO60938 352 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 KLF7O75840 302 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 KRT34O76011 436 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 NDUFA7O95182 113 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 GTF2F2P13984 249 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 IL3RAP26951 378 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 SERPINB6P35237 376 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 SPRR1AP35321 89 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 CA7P43166 264 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 UBE2IP63279 158 aaKnown RBP-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 OR5I1Q13606 314 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 CCL15Q16663 113 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 KCTD21Q4G0X4 260 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 SPRNQ5BIV9 151 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 JAKMIP3Q5VZ66 844 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 HAGHLQ6PII5 290 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 B3GLCTQ6Y288 498 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 CLEC20AQ6ZU45 233 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 CYP4Z1Q86W10 505 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 UNC93AQ86WB7 457 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 NIT1Q86X76 327 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 PRELID2Q8N945 189 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 NAT14Q8WUY8 206 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 SLC7A6Q92536 515 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 FGF13Q92913 245 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 ERO1AQ96HE7 468 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 TPD52L3Q96J77 140 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 RNF2Q99496 336 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 SLC39A3Q9BRY0 314 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 LIMD2Q9BT23 127 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 ANKRD2Q9GZV1 360 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 TSPYL1Q9H0U9 437 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 HSD3B7Q9H2F3 369 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 SMDT1Q9H4I9 107 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 REEP1Q9H902 201 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 CHCHD3Q9NX63 227 aaKnown RBP-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 MTFP1Q9UDX5 166 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 HS3ST2Q9Y278 367 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 AK6Q9Y3D8 172 aaKnown RBP-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 LINC00588Q9Y4M8 146 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 COMMD10Q9Y6G5 202 aa-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 RBBP6Q7Z6E9 1792 aaKnown RBP-1.82□□□□□ -2.7
RNU6-478P-201ENST00000363904 WDR90Q96KV7 1748 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 FANCMQ8IYD8 2048 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 DYNC1H1Q14204 4646 aaKnown RBP-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 MTORP42345 2549 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 IGHV3-73A0A0B4J1V6 119 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 TCRBV9S1A1TA0A576 114 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 E9PMD0 336 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 K7EPK0 472 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 SGK494L7N484 410 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 ANGPT2O15123 496 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 PSTPIP1O43586 416 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 PLEKHA8P1O95397 391 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 LY6G6CO95867 125 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 SHBGP04278 402 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 REG1AP05451 166 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 PRSS3P35030 304 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 HSD17B2P37059 387 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 CASP4P49662 377 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 USH1GQ495M9 461 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 HES3Q5TGS1 186 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 TPGS2Q68CL5 300 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 TMED8Q6PL24 325 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 LINC00322Q6ZN03 302 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 TEX9Q8N6V9 391 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 OR2G2Q8NGZ5 317 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 RASSF5Q8WWW0 418 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 SECISBP2Q96T21 854 aaKnown RBP-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 CHCHD6Q9BRQ6 235 aa-1.83□□□□□ -2.7
RNU6-478P-201ENST00000363904 LPAR2Q9HBW0 351 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms