RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 HAVCR1Q96D42 359 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 WBP1Q96G27 269 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 WFIKKN1Q96NZ8 548 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 NICN1Q9BSH3 213 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ZDHHC11Q9H8X9 412 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF71Q9NQZ8 489 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 GPR173Q9NS66 373 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 RBFOX1Q9NWB1 397 aaKnown RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF581Q9P0T4 197 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF629Q9UEG4 869 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-202ENST00000359366 GPR160Q9UJ42 338 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 RHBDD3Q9Y3P4 386 aa4.42□□□□□ -1.7
ATXN3-202ENST00000359366 DIDO1Q9BTC0 2240 aaKnown RBP4.41□□□□□ -1.7
ATXN3-202ENST00000359366 IGKV3D-15A0A087WSY6 115 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 IGHV3-64DA0A0J9YX35 117 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 C5orf49A4QMS7 147 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 BTBD17A6NE02 478 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 TMEM235A6NFC5 223 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 GGT3PA6NGU5 568 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 OR2AT4A6NND4 320 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 LYZL6O75951 148 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 NGFP01138 241 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 ALDOBP05062 364 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 CSN2P05814 226 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 CELA3BP08861 270 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 CST2P09228 141 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 MMP7P09237 267 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-202ENST00000359366 FAM157BP0CG42 384 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 FSTP19883 344 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 CRYGSP22914 178 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 AGTR1P30556 359 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF93P35789 620 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-202ENST00000359366 MMP15P51511 669 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 PKIAP61925 76 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 HIST1H3AP68431 136 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF92Q03936 586 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 PMPCAQ10713 525 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 HABP2Q14520 560 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-202ENST00000359366 RAB35Q15286 201 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 TATDN3Q17R31 274 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 SPATA46Q5T0L3 261 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 HIST2H3PS2Q5TEC6 136 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 AWAT2Q6E213 333 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF585AQ6P3V2 769 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 HIST2H3AQ71DI3 136 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 TGIF2LXQ8IUE1 241 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 ZNF101Q8IZC7 436 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 PAQR4Q8N4S7 273 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-202ENST00000359366 CHST4Q8NCG5 386 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 BHLHE23Q8NDY6 225 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 BEND2Q8NDZ0 799 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 OR10A7Q8NGE5 316 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 OR5D14Q8NGL3 314 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 OR14K1Q8NGZ2 314 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 SMIM4Q8WVI0 70 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 CORO2AQ92828 525 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 SPTSSAQ969W0 71 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 REEP6Q96HR9 211 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 GPER1Q99527 375 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 ELL3Q9HB65 397 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-202ENST00000359366 ACKR4Q9NPB9 350 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 TMEM138Q9NPI0 162 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 SLC17A5Q9NRA2 495 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 PKDREJQ9NTG1 2253 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 TRAV17A0A0B4J275 112 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 FAM230AA0A1W2PPH8 454 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 OR6C6A6NF89 314 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 NUDT19A8MXV4 375 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 SMLR1H3BR10 107 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 LDLRAD4O15165 306 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 SPRY1O43609 319 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-202ENST00000359366 ANGPTL7O43827 346 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 RAD51DO75771 328 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 DIRAS3O95661 229 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 MPIG6BO95866 241 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 IL18BPO95998 194 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 ACTL6AO96019 429 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 GNB3P16520 340 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 SNRPD2P62316 118 aaKnown RBP4.41□□□□□ -1.7
ATXN3-202ENST00000359366 KLF9Q13886 244 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-202ENST00000359366 PDCD1Q15116 288 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 VWA1Q6PCB0 445 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 HAGHLQ6PII5 290 aaPredicted RBP4.41□□□□□ -1.7
ATXN3-202ENST00000359366 CRIP3Q6Q6R5 217 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 GLIPR1L1Q6UWM5 242 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 LYPD6Q86Y78 171 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 GVQW1Q8N7I0 195 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 C9orf106Q8NAJ2 232 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 FCAMRQ8WWV6 532 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 EXTL1Q92935 676 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 PRRX2Q99811 253 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 TOLLIPQ9H0E2 274 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 POFUT1Q9H488 388 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 HEXA-AS1Q9H8Q6 139 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 TIMM10BQ9Y5J6 103 aa4.41□□□□□ -1.7
ATXN3-202ENST00000359366 PUS1Q9Y606 427 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATXN3-202ENST00000359366 A0A0A6YYD4 124 aa4.4□□□□□ -1.7
ATXN3-202ENST00000359366 M0QYG6 137 aa4.4□□□□□ -1.7
ATXN3-202ENST00000359366 DLL1O00548 723 aa4.4□□□□□ -1.7
ATXN3-202ENST00000359366 XRCC3O43542 346 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms