RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SOX7Q9BT81 388 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 EGLN1Q9GZT9 426 aa12.15□□□□□ -0.46
VCP-201ENST00000358901 A0A1W2PQF6 199 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 ABCD4O14678 606 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 CA6P23280 308 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 GSK3AP49840 483 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 UBE2G1P62253 170 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 IFITM2Q01629 132 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 TMEM267Q0VDI3 215 aaPredicted RBP12.14□□□□□ -0.47
VCP-201ENST00000358901 HES1Q14469 280 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 RPS4Y2Q8TD47 263 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 PECRQ9BY49 303 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 COMMD5Q9GZQ3 224 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 WBP1LQ9NX94 342 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 PMS2P1A4D2B8 440 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 CNIH1O95406 144 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 METTL15P1P0C7V9 234 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 ZXDAP98168 799 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 IL11RAQ14626 422 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 TMEM104Q8NE00 496 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 ZFP64Q9NPA5 681 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 SNRNP200O75643 2136 aaKnown RBP12.14□□□□□ -0.47
VCP-201ENST00000358901 SPTBN1Q01082 2364 aaKnown RBP12.14□□□□□ -0.47
VCP-201ENST00000358901 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
VCP-201ENST00000358901 DTYMKP23919 212 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 IL3RAP26951 378 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 RAB13P51153 203 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 CLPPQ16740 277 aaPredicted RBP12.14□□□□□ -0.47
VCP-201ENST00000358901 MICBQ29980 383 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 SAT2Q96F10 170 aaPredicted RBP12.14□□□□□ -0.47
VCP-201ENST00000358901 CTDSP1Q9GZU7 261 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 A0A1W2PR80 420 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 NGFP01138 241 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 ERGP11308 486 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 SUB1P53999 127 aaKnown RBP eCLIP12.14□□□□□ -0.474e-9■■■■■ 59.5
VCP-201ENST00000358901 FOXL2P58012 376 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 TMEM37Q8WXS4 190 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 CORO2AQ92828 525 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 ZNF426Q9BUY5 554 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 PROCRQ9UNN8 238 aa12.14□□□□□ -0.47
VCP-201ENST00000358901 SCN2AQ99250 2005 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 TRAF3IP2O43734 574 aaPredicted RBP12.13□□□□□ -0.47
VCP-201ENST00000358901 SOX15O60248 233 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 BGLAPP02818 100 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 TMEM11P17152 192 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 RPS23P62266 143 aaKnown RBP12.13□□□□□ -0.47
VCP-201ENST00000358901 OR1C1Q15619 314 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 SMIM21Q3B7S5 101 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 PLAC9Q5JTB6 97 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 SKA3Q8IX90 412 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 CARFQ8N187 725 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 SLC26A10Q8NG04 563 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 RNF133Q8WVZ7 376 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 ISOC2Q96AB3 205 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 FAM173AQ9BQD7 235 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 CACNG5Q9UF02 275 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 SF3B6Q9Y3B4 125 aaKnown RBP12.13□□□□□ -0.47
VCP-201ENST00000358901 THSD7AQ9UPZ6 1657 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 hCG_1809904A0A1W2PP81 198 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 A0A1W2PPE2 198 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 A0A1W2PR64 198 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 A0A1W2PRV1 198 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 ERVH48-1M5A8F1 160 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 GPR37O15354 613 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 OR10D4PQ8NGN7 298 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 ADAT3Q96EY9 351 aaPredicted RBP12.13□□□□□ -0.47
VCP-201ENST00000358901 ARG1P05089 322 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 CTSDP07339 412 aaPredicted RBP12.13□□□□□ -0.47
VCP-201ENST00000358901 PNLIPP16233 465 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 NOVA1P51513 510 aaKnown RBP12.13□□□□□ -0.47
VCP-201ENST00000358901 TAS2R45P59539 299 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 AARDQ4LEZ3 155 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 GPR137Q96N19 417 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 CRISPLD2Q9H0B8 497 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 ARRDC1-AS1Q9H2J1 176 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 AMDHD2Q9Y303 409 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 NCOR1O75376 2440 aa12.13□□□□□ -0.47
VCP-201ENST00000358901 DVL1O14640 695 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 HEXAP06865 529 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 DAOP14920 347 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 MPGP29372 298 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 CEACAM6P40199 344 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 C19orf57Q0VDD7 668 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 IL13RA2Q14627 380 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 ZNF66Q6ZN08 573 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 DBX2Q6ZNG2 339 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 OR10V1Q8NGI7 309 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 RAB40CQ96S21 281 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 IFT22Q9H7X7 185 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 ZDHHC11Q9H8X9 412 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 ANKRD31Q8N7Z5 1873 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 COL11A2P13942 1736 aaPredicted RBP12.12□□□□□ -0.47
VCP-201ENST00000358901 CLDN34H7C241 214 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 KIR3DL2P43630 455 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 RAC3P60763 192 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 DCAF12L2Q5VW00 463 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 C9orf40Q8IXQ3 194 aa12.12□□□□□ -0.47
VCP-201ENST00000358901 ADAD2Q8NCV1 583 aaKnown RBP12.12□□□□□ -0.47
VCP-201ENST00000358901 OR5B3Q8NH48 314 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms