RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 SLC34A2O95436 690 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 HEXBP07686 556 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 OR2B8PP59922 312 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 EWSR1Q01844 656 aaKnown RBP eCLIP9.94□□□□□ -0.82
CAPN9-202ENST00000354537 RSPO1Q2MKA7 263 aaPredicted RBP9.94□□□□□ -0.82
CAPN9-202ENST00000354537 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.94□□□□□ -0.82
CAPN9-202ENST00000354537 OR2C3Q8N628 320 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 FADS6Q8N9I5 356 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 OR10G4Q8NGN3 311 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 FAM213BQ8TBF2 198 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 SPIN2AQ99865 258 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 SPIN2BQ9BPZ2 258 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 FAAP24Q9BTP7 215 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 PCED1AQ9H1Q7 454 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 METTL7AQ9H8H3 244 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 ZNF286AQ9HBT8 521 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 TRBV11-1A0A0K0K1C0 115 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 DUXBA0A1W2PPF3 345 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 METTL12A8MUP2 240 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 ZNF814B7Z6K7 855 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 ZFAND5O76080 213 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 DIRAS3O95661 229 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 HSPB1P04792 205 aaKnown RBP9.94□□□□□ -0.82
CAPN9-202ENST00000354537 FHITP49789 147 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 MTCP1P56278 107 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 CFHR1Q03591 330 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 RSU1Q15404 277 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 TGIF1Q15583 401 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 ZNF600Q6ZNG1 722 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 FBXL14Q8N1E6 418 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 OR14L1PQ8NHC6 308 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 NPRL2Q8WTW4 380 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 MR1Q95460 341 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 NABP1Q96AH0 204 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 FBXO17Q96EF6 278 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 GNPNAT1Q96EK6 184 aaPredicted RBP9.94□□□□□ -0.82
CAPN9-202ENST00000354537 BCL2L14Q9BZR8 327 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 SH3BGRL3Q9H299 93 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 PLEKHF2Q9H8W4 249 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 FGF21Q9NSA1 209 aa9.94□□□□□ -0.82
CAPN9-202ENST00000354537 F5P12259 2224 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 ELOA3CA0A087WX78 387 aaPredicted RBP9.93□□□□□ -0.82
CAPN9-202ENST00000354537 IGHV1OR15-9A0A0B4J2B8 117 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 C5orf63A6NC05 138 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 EPOPA6NHQ4 379 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 SHISA7A6NL88 538 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 B4DEV8 164 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 ZNF732B4DXR9 585 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 SEC14L6B5MCN3 397 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 F5H5K5 113 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 M0R135 149 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 SRP19P09132 144 aaKnown RBP9.93□□□□□ -0.82
CAPN9-202ENST00000354537 OR13C7P0DN81 318 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 CEACAM1P13688 526 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 S100A2P29034 98 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 PPP1CCP36873 323 aaKnown RBP9.93□□□□□ -0.82
CAPN9-202ENST00000354537 H3F3AP84243 136 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 NHLH2Q02577 135 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 SHBQ15464 509 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 SP6Q3SY56 376 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 TMEM211Q6ICI0 200 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 SPSB3Q6PJ21 355 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 WDR74Q6RFH5 385 aaPredicted RBP9.93□□□□□ -0.82
CAPN9-202ENST00000354537 TMEM182Q6ZP80 229 aaPredicted RBP9.93□□□□□ -0.82
CAPN9-202ENST00000354537 LHFPL2Q6ZUX7 228 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 SYT13Q7L8C5 426 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 HSD17B11Q8NBQ5 300 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 OR52M1Q8NGK5 317 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 TOMM40LQ969M1 308 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 PIGTQ969N2 578 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 SGK3Q96BR1 496 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 RBMXL1Q96E39 390 aaKnown RBP9.93□□□□□ -0.82
CAPN9-202ENST00000354537 ZNF799Q96GE5 643 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 HDHD3Q9BSH5 251 aaPredicted RBP9.93□□□□□ -0.82
CAPN9-202ENST00000354537 ZNF391Q9UJN7 358 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 A0A1W2PNR3 127 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 FAM230AA0A1W2PPH8 454 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 H3BQ15 152 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 HSD17B6O14756 317 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 TOX3O15405 576 aaPredicted RBP9.93□□□□□ -0.82
CAPN9-202ENST00000354537 XRCC2O43543 280 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 CLDN17P56750 224 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 SRSF7Q16629 238 aaKnown RBP eCLIP9.93□□□□□ -0.82
CAPN9-202ENST00000354537 OR2B11Q5JQS5 317 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 ZNF506Q5JVG8 444 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 C7orf61Q8IZ16 206 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 ZNF610Q8N9Z0 462 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 OR2G3Q8NGZ4 309 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 TMEM56Q96MV1 263 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 GAR1Q9NY12 217 aaKnown RBP9.93□□□□□ -0.82
CAPN9-202ENST00000354537 PUS1Q9Y606 427 aaKnown RBP eCLIP9.93□□□□□ -0.82
CAPN9-202ENST00000354537 TMEM56-RWDD3S4R434 201 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 CHD7Q9P2D1 2997 aa9.93□□□□□ -0.82
CAPN9-202ENST00000354537 CLEC18AA5D8T8 446 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 TRDCB7Z8K6 153 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 RPL36A-HNRNPH2H7BZ11 118 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 DHHO43323 396 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 C1QL1O75973 258 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 ONECUT2O95948 504 aa9.92□□□□□ -0.82
CAPN9-202ENST00000354537 HBE1P02100 147 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms