RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 IL12BP29460 328 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 SFTPDP35247 375 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 CNKSR3Q6P9H4 555 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 OR10S1Q8NGN2 331 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 OR1P1Q8NH06 330 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 A0A0J9YY10 115 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 IFI6P09912 130 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 HOXA6P31267 233 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 ZNF266Q14584 549 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 TMEM187Q14656 261 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 C2orf27AQ580R0 203 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 DEGS2Q6QHC5 323 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 MRPL41Q8IXM3 137 aaKnown RBP13.44□□□□□ -0.26
LMNA-201ENST00000347559 GPR137CQ8N3F9 429 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 OR2C3Q8N628 320 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 OR11L1Q8NGX0 322 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 LIN37Q96GY3 246 aaPredicted RBP13.44□□□□□ -0.26
LMNA-201ENST00000347559 LRFN1Q9P244 771 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 ZNF319Q9P2F9 582 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 GOLT1BQ9Y3E0 138 aa13.44□□□□□ -0.26
LMNA-201ENST00000347559 M0R143 59 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 HSPA12AO43301 675 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 AKT2P31751 481 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 CSNK1A1P48729 337 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 CMTM1Q8IZ96 169 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 FBXL14Q8N1E6 418 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 C12orf76Q8N812 135 aaPredicted RBP13.43□□□□□ -0.26
LMNA-201ENST00000347559 HIST1H2AAQ96QV6 131 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 NAA60Q9H7X0 242 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 DKKL1Q9UK85 242 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 SHANK1Q9Y566 2161 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 PHF3Q92576 2039 aaKnown RBP13.43□□□□□ -0.26
LMNA-201ENST00000347559 IGSF23A1L1A6 192 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 IFNL4K9M1U5 179 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 PHF1O43189 567 aaPredicted RBP13.43□□□□□ -0.26
LMNA-201ENST00000347559 PGCP20142 388 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 SLC6A8P48029 635 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 TLE1Q04724 770 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 IL13RA2Q14627 380 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 P2RY6Q15077 328 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 FAM57BQ71RH2 274 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 OR8B12Q8NGG6 310 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 OR5C1Q8NGR4 320 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 BOD1Q96IK1 185 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 CDCA3Q99618 268 aaPredicted RBP13.43□□□□□ -0.26
LMNA-201ENST00000347559 ACTR3CQ9C0K3 210 aaPredicted RBP13.43□□□□□ -0.26
LMNA-201ENST00000347559 CLDN16Q9Y5I7 305 aa13.43□□□□□ -0.26
LMNA-201ENST00000347559 CD55P08174 381 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 NPSP0C0P6 89 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 RPL29P47914 159 aaKnown RBP13.42□□□□□ -0.26
LMNA-201ENST00000347559 ZNF121P58317 390 aaPredicted RBP13.42□□□□□ -0.26
LMNA-201ENST00000347559 PAX5Q02548 391 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 PMS2P11Q13670 270 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 MPV17LQ2QL34 196 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 ZNF506Q5JVG8 444 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 OR10A7Q8NGE5 316 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 CLDND2Q8NHS1 167 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 TMEM171Q8WVE6 324 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 RP1P56715 2156 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 F5P12259 2224 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 IGKV1-9A0A0C4DH69 117 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 C2orf72A6NCS6 295 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 CDAP32320 146 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 PPA1Q15181 289 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 KISS1Q15726 138 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 ZNF66Q6ZN08 573 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 LGI3Q8N145 548 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 LAMP3Q9UQV4 416 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 SSSCA1O60232 199 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 SCGB1D1O95968 90 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 ACRP10323 421 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 ZNF542PQ5EBM4 170 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 NCR3LG1Q68D85 454 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 BRICD5Q6PL45 260 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 NUP54Q7Z3B4 507 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 TMEM37Q8WXS4 190 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 CALHM2Q9HA72 323 aa13.42□□□□□ -0.26
LMNA-201ENST00000347559 CHD7Q9P2D1 2997 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 ERVS71-1P61550 626 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 TEX38Q6PEX7 206 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 FAM185AQ8N0U4 392 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 OR2AJ1Q8NGZ0 328 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 FAAP24Q9BTP7 215 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 TMEM208Q9BTX3 173 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 FAM221BA6H8Z2 402 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 CLPSP04118 112 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 IDH3GP51553 393 aaPredicted RBP13.41□□□□□ -0.26
LMNA-201ENST00000347559 POLR2HP52434 150 aaKnown RBP13.41□□□□□ -0.26
LMNA-201ENST00000347559 BIDP55957 195 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 CLN3Q13286 438 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 ZNF705AQ6ZN79 300 aaPredicted RBP13.41□□□□□ -0.26
LMNA-201ENST00000347559 LIAT1Q6ZQX7 453 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 ZNF283Q8N7M2 679 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 DYRK2Q92630 601 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 PIGTQ969N2 578 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 ANXA10Q9UJ72 324 aa13.41□□□□□ -0.26
LMNA-201ENST00000347559 CYB5R3P00387 301 aaPredicted RBP13.4□□□□□ -0.26
LMNA-201ENST00000347559 FCGR2AP12318 317 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 FAM189A2Q15884 450 aa13.4□□□□□ -0.26
LMNA-201ENST00000347559 SLC25A24Q6NUK1 477 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms