RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 FAM26DQ5JW98 314 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 NOXO1Q8NFA2 376 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 ZNF707Q96C28 371 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-202ENST00000347401 OPN4Q9UHM6 478 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 POM121BA6NF01 834 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 C11orf94C9JXX5 98 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 SLC2A10O95528 541 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 PVRP15151 417 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 VN1R2Q8NFZ6 395 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 OR10AD1Q8NGE0 317 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 PAAF1Q9BRP4 392 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 KLF13Q9Y2Y9 288 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-202ENST00000347401 LRRC10Q5BKY1 277 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 SH2D5Q6ZV89 423 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 VASH2Q86V25 355 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 NPEPL1Q8NDH3 523 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 NT5CQ8TCD5 201 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 ST6GAL2Q96JF0 529 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 A0A1B0GU03 582 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 MPDU1O75352 247 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 ACTL6AO96019 429 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 CTSDP07339 412 aaPredicted RBP11.94□□□□□ -0.5
COL6A3-202ENST00000347401 ACP1P24666 158 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 EPHA2P29317 976 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 OPRM1P35372 400 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 GNB1P62873 340 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 NKAIN1Q4KMZ8 207 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 LIAT1Q6ZQX7 453 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 H1FXQ92522 213 aaKnown RBP11.94□□□□□ -0.5
COL6A3-202ENST00000347401 ANXA10Q9UJ72 324 aa11.94□□□□□ -0.5
COL6A3-202ENST00000347401 MS4A18H0YCH9 400 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 GRPP07492 148 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 PRR35P0CG20 571 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 MS4A18Q3C1V0 323 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 SLC36A1Q7Z2H8 476 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 RBM45Q8IUH3 476 aaKnown RBP11.93□□□□□ -0.5
COL6A3-202ENST00000347401 C1orf174Q8IYL3 243 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 MCHR2Q969V1 340 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 GMLQ99445 158 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 FXYD1O00168 92 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 CBR3O75828 277 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 PIAS2O75928 621 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 SLC10A3P09131 477 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 GABRA1P14867 456 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 HAAOP46952 286 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 RPS16P62249 146 aaKnown RBP11.93□□□□□ -0.5
COL6A3-202ENST00000347401 SRSF9Q13242 221 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL6A3-202ENST00000347401 PPP1R1AQ13522 171 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 ANKRD55Q3KP44 614 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 TOX2Q96NM4 488 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 ISG20L2Q9H9L3 353 aaKnown RBP11.93□□□□□ -0.5
COL6A3-202ENST00000347401 TMEM230Q96A57 120 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 COL6A6A6NMZ7 2263 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 PCMT1P22061 227 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 ISXQ2M1V0 245 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 TSC2P49815 1807 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 A0A1W2PR48 441 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 CA11O75493 328 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 FAM206AQ9NX38 181 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 B9D1Q9UPM9 204 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 SDCBPO00560 298 aaPredicted RBP11.93□□□□□ -0.5
COL6A3-202ENST00000347401 NXPH3O95157 252 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 HLA-DRB5Q30154 266 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 TMEM251Q8N6I4 163 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 OR6C1Q96RD1 312 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 GVINP1Q7Z2Y8 2422 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 TRBV5-4A0A0C4DH59 114 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 OR2J2O76002 312 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 AKR7A3O95154 331 aa11.93□□□□□ -0.5
COL6A3-202ENST00000347401 PLXNB1O43157 2135 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 C3orf85A0A1B0GTC6 90 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 A0A1W2PNV4 684 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 CRHP06850 196 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 SLURP2P0DP57 97 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 LSM11P83369 360 aaKnown RBP eCLIP11.92□□□□□ -0.5
COL6A3-202ENST00000347401 BCDIN3DQ7Z5W3 292 aaKnown RBP11.92□□□□□ -0.5
COL6A3-202ENST00000347401 MRPL43Q8N983 215 aaKnown RBP11.92□□□□□ -0.5
COL6A3-202ENST00000347401 BAHD1Q8TBE0 780 aaPredicted RBP11.92□□□□□ -0.5
COL6A3-202ENST00000347401 FGF21Q9NSA1 209 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 AMDHD2Q9Y303 409 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 C5orf49A4QMS7 147 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 OR4S2Q8NH73 311 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 OR4C12Q96R67 309 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 G3V3Y1 287 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 GPR3P46089 330 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 CXCL12P48061 93 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 PTOV1Q86YD1 416 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 A4GNTQ9UNA3 340 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 MORN1Q5T089 497 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 FBXL17Q9UF56 701 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 NEURL1O76050 574 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 IAPPP10997 89 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 CYBAP13498 195 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 OR1F12Q8NHA8 337 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 SIGLEC11Q96RL6 698 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 OR6C3Q9NZP0 311 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 RER1O15258 196 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 GYPAP02724 150 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 TMEM33P57088 247 aa11.92□□□□□ -0.5
COL6A3-202ENST00000347401 DMRT1Q9Y5R6 373 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms