RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 C1orf147Q96MC9 270 aaPredicted RBP16.23■□□□□ 0.19
SMPD1-201ENST00000342245 AGMATQ9BSE5 352 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 AURKAIP1Q9NWT8 199 aaPredicted RBP16.23■□□□□ 0.19
SMPD1-201ENST00000342245 NAT8Q9UHE5 227 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 MRPS23Q9Y3D9 190 aaKnown RBP16.23■□□□□ 0.19
SMPD1-201ENST00000342245 ZNF878C9JN71 531 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 TMEM11P17152 192 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 ZNF41P51814 821 aaPredicted RBP16.23■□□□□ 0.19
SMPD1-201ENST00000342245 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMPD1-201ENST00000342245 TMEM183BQ1AE95 376 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 MRGPRDQ8TDS7 321 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 ZCCHC14Q8WYQ9 949 aaKnown RBP16.23■□□□□ 0.19
SMPD1-201ENST00000342245 TXNIPQ9H3M7 391 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 GPR35Q9HC97 309 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 TYMSP04818 313 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 BAXQ07812 192 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 FBXO42Q6P3S6 717 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 DNM1P34Q6PK57 102 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 OR51G1Q8NGK1 321 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 ORAOV1Q8WV07 137 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 OR2A5Q96R48 311 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 TBX15Q96SF7 602 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 PLK3Q9H4B4 646 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 LRIT1Q9P2V4 623 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 SLC7A11Q9UPY5 501 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 TRBV11-1A0A0K0K1C0 115 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 A0A1W2PRU2 124 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 LINC01553A4QN01 128 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 NRG2O14511 850 aaPredicted RBP16.22■□□□□ 0.19
SMPD1-201ENST00000342245 MT-ATP6P00846 226 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 CTLA4P16410 223 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 CNN1P51911 297 aaKnown RBP16.22■□□□□ 0.19
SMPD1-201ENST00000342245 PIGPP57054 158 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 IL24Q13007 206 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 EIF3IQ13347 325 aaKnown RBP16.22■□□□□ 0.19
SMPD1-201ENST00000342245 ACKR1Q16570 336 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 ABCA11PQ4W5N1 156 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 LY6G5CQ5SRR4 150 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 KLHL24Q6TFL4 600 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 SPRED2Q7Z698 418 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 OR4D5Q8NGN0 318 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 FOXN4Q96NZ1 517 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 MS4A10Q96PG2 267 aa16.22■□□□□ 0.19
SMPD1-201ENST00000342245 MAP1LC3B2A6NCE7 125 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 NXPH2O95156 264 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 IGHMP01871 453 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 GALR1P47211 349 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 SMIM15Q7Z3B0 74 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 TMEM52Q8NDY8 209 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 OR4C3Q8NH37 302 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 DAZLQ92904 295 aaKnown RBP16.21■□□□□ 0.19
SMPD1-201ENST00000342245 MAP1LC3BQ9GZQ8 125 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 C11orf1Q9H5F2 150 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 CALHM2Q9HA72 323 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 FAM206AQ9NX38 181 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 GNG13Q9P2W3 67 aa16.21■□□□□ 0.19
SMPD1-201ENST00000342245 TRAV36DV7A0A075B6V5 113 aa16.21■□□□□ 0.18
SMPD1-201ENST00000342245 CDS2O95674 445 aa16.21■□□□□ 0.18
SMPD1-201ENST00000342245 DBHP09172 617 aa16.21■□□□□ 0.18
SMPD1-201ENST00000342245 CHRNB4P30926 498 aa16.21■□□□□ 0.18
SMPD1-201ENST00000342245 SGCBQ16585 318 aa16.21■□□□□ 0.18
SMPD1-201ENST00000342245 LYZL2Q7Z4W2 148 aa16.21■□□□□ 0.18
SMPD1-201ENST00000342245 BANF2Q9H503 90 aa16.21■□□□□ 0.18
SMPD1-201ENST00000342245 SERINC1Q9NRX5 453 aa16.21■□□□□ 0.18
SMPD1-201ENST00000342245 HRASP01112 189 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 IFNA1P01562 189 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 TTRP02766 147 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 TDGF1P13385 188 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 UBE2NP61088 152 aaKnown RBP16.2■□□□□ 0.18
SMPD1-201ENST00000342245 SHHQ15465 462 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 ACSF3Q4G176 576 aaPredicted RBP16.2■□□□□ 0.18
SMPD1-201ENST00000342245 OTPQ5XKR4 325 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 ETFRF1Q6IPR1 90 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 TEX43Q6ZNM6 134 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 C16orf82Q7Z2V1 217 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 P4HA3Q7Z4N8 544 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 FAM160A2Q8N612 972 aaPredicted RBP16.2■□□□□ 0.18
SMPD1-201ENST00000342245 BCORP1Q8N888 145 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 OR51T1Q8NGJ9 327 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 CAPNS2Q96L46 248 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 VN1R1Q9GZP7 353 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 TMEM74BQ9NUR3 256 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 C11orf98E9PRG8 122 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 H7BYZ3 331 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 MMP9P14780 707 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 OR52M1Q8NGK5 317 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 ANAPC16Q96DE5 110 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 SLC35E1Q96K37 410 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 PECRQ9BY49 303 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 LYRM2Q9NU23 88 aaPredicted RBP16.2■□□□□ 0.18
SMPD1-201ENST00000342245 OR6C3Q9NZP0 311 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 PILRAQ9UKJ1 303 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 CCL26Q9Y258 94 aa16.2■□□□□ 0.18
SMPD1-201ENST00000342245 FOXI3A8MTJ6 420 aaPredicted RBP16.19■□□□□ 0.18
SMPD1-201ENST00000342245 LATO43561 262 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 CBR3O75828 277 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 SRP14P37108 136 aaKnown RBP16.19■□□□□ 0.18
SMPD1-201ENST00000342245 SRPXP78539 464 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 CYP2G1PQ6ZSU1 146 aa16.19■□□□□ 0.18
SMPD1-201ENST00000342245 OR2AJ1Q8NGZ0 328 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms