RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 OR5AC1P0C628 307 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 KLK2P20151 261 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 OPRM1P35372 400 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 YPEL5P62699 121 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 GAMTQ14353 236 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 ZFP62Q8NB50 900 aaPredicted RBP12.04□□□□□ -0.48
SYNE3-201ENST00000334258 RHBDD1Q8TEB9 315 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 RAB39BQ96DA2 213 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 FSCN3Q9NQT6 498 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 FCGR2AP12318 317 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 MRPS21P82921 87 aaKnown RBP12.04□□□□□ -0.48
SYNE3-201ENST00000334258 DEFB133Q30KQ1 61 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 GFI1BQ5VTD9 330 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 SPNS3Q6ZMD2 512 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 C1QL4Q86Z23 238 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 LFNGQ8NES3 379 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 OR2G3Q8NGZ4 309 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 RTN4IP1Q8WWV3 396 aaPredicted RBP12.04□□□□□ -0.48
SYNE3-201ENST00000334258 CHST11Q9NPF2 352 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 RFNGQ9Y644 331 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 PCDH15Q96QU1 1955 aa12.04□□□□□ -0.48
SYNE3-201ENST00000334258 LAMA5O15230 3695 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 FTCDNL1E5RQL4 147 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 TSPAN2O60636 221 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 GABREP78334 506 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 GNMTQ14749 295 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 C4orf17Q53FE4 359 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 ETFRF1Q6IPR1 90 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 P4HA3Q7Z4N8 544 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 OR5L1Q8NGL2 311 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 MUCL1Q96DR8 90 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 PGAM5Q96HS1 289 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 MESP1Q9BRJ9 268 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 GINS3Q9BRX5 216 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 PHF7Q9BWX1 381 aaPredicted RBP12.03□□□□□ -0.48
SYNE3-201ENST00000334258 NSG1A0A0A6YYJ2 146 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 SERPINE3A8MV23 424 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF587BE7ETH6 402 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 H0YL77 283 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 ST8SIA3O43173 380 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 F10P00742 488 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 IGKV3-11P04433 115 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 CTSDP07339 412 aaPredicted RBP12.03□□□□□ -0.48
SYNE3-201ENST00000334258 RRADP55042 308 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 DCAF7P61962 342 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 CCL20P78556 96 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 MFAP5Q13361 173 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 SHISA6Q6ZSJ9 500 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 NAXEQ8NCW5 288 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 PIGTQ969N2 578 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 WWTR1Q9GZV5 400 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 LANCL2Q9NS86 450 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 LHFPL6Q9Y693 200 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 IGKV1-9A0A0C4DH69 117 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 RBFOX3A6NFN3 312 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 CRYM-AS1A6NIL9 109 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 FABP4P15090 132 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 GFERP55789 205 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 HNRNPKP61978 463 aaKnown RBP eCLIP12.03□□□□□ -0.482e-8■■■■■ 27.6
SYNE3-201ENST00000334258 MEX3BQ6ZN04 569 aaKnown RBP12.03□□□□□ -0.48
SYNE3-201ENST00000334258 CPEB2Q7Z5Q1 589 aaKnown RBP12.03□□□□□ -0.48
SYNE3-201ENST00000334258 Q8WTZ3 238 aa12.03□□□□□ -0.48
SYNE3-201ENST00000334258 MCTS1Q9ULC4 181 aaKnown RBP12.03□□□□□ -0.48
SYNE3-201ENST00000334258 A0A1W2PQD3 144 aa12.02□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF726A6NNF4 738 aa12.02□□□□□ -0.48
SYNE3-201ENST00000334258 F5H5K5 113 aa12.02□□□□□ -0.48
SYNE3-201ENST00000334258 TRGC2P03986 189 aa12.02□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF728P0DKX0 622 aa12.02□□□□□ -0.48
SYNE3-201ENST00000334258 ZNF25P17030 456 aaPredicted RBP12.02□□□□□ -0.48
SYNE3-201ENST00000334258 GALNSP34059 522 aa12.02□□□□□ -0.48
SYNE3-201ENST00000334258 FOXL2P58012 376 aa12.02□□□□□ -0.48
SYNE3-201ENST00000334258 GPR157Q5UAW9 335 aa12.02□□□□□ -0.48
SYNE3-201ENST00000334258 CDCP2Q5VXM1 449 aa12.02□□□□□ -0.48
SYNE3-201ENST00000334258 OR2T2Q6IF00 324 aa12.02□□□□□ -0.48
SYNE3-201ENST00000334258 SHDQ96IW2 340 aa12.02□□□□□ -0.48
SYNE3-201ENST00000334258 PI4KAP42356 2102 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 TGIF2-C20orf24A0A0A6YYL0 155 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 SLC33A1O00400 549 aaPredicted RBP12.02□□□□□ -0.49
SYNE3-201ENST00000334258 CXCL1P09341 107 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 ANOS1P23352 680 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 APOBEC1P41238 236 aaKnown RBP12.02□□□□□ -0.49
SYNE3-201ENST00000334258 DLK1P80370 383 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 UBE2V2Q15819 145 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 ZNF574Q6ZN55 896 aaPredicted RBP12.02□□□□□ -0.49
SYNE3-201ENST00000334258 DOK3Q7L591 496 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 SUMF1Q8NBK3 374 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 OR52M1Q8NGK5 317 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 STT3BQ8TCJ2 826 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 LMX1AQ8TE12 382 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 C2orf88Q9BSF0 95 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 ABHD14AQ9BUJ0 271 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 MOB1AQ9H8S9 216 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 SERINC1Q9NRX5 453 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 CUTCQ9NTM9 273 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 LIPGQ9Y5X9 500 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 SPTBN2O15020 2390 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 LOC400499M0QZD8 3231 aa12.02□□□□□ -0.49
SYNE3-201ENST00000334258 IGHV5-51A0A0C4DH38 117 aa12.01□□□□□ -0.49
SYNE3-201ENST00000334258 TSTD3H0UI37 97 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms