RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 KLF2Q9Y5W3 355 aaPredicted RBP15.04■□□□□ -0
DDX28-201ENST00000332395 C13orf42A0A1B0GVH6 325 aa15.04■□□□□ -0
DDX28-201ENST00000332395 C5orf49A4QMS7 147 aa15.04■□□□□ -0
DDX28-201ENST00000332395 ZNF850A8MQ14 1090 aa15.04■□□□□ -0
DDX28-201ENST00000332395 MPTX1A8MV57 137 aa15.04■□□□□ -0
DDX28-201ENST00000332395 ABCD4O14678 606 aa15.04■□□□□ -0
DDX28-201ENST00000332395 RRP8O43159 456 aaKnown RBP15.04■□□□□ -0
DDX28-201ENST00000332395 OR2F2O95006 317 aa15.04■□□□□ -0
DDX28-201ENST00000332395 SFTPBP07988 381 aa15.04■□□□□ -0
DDX28-201ENST00000332395 OR2F1Q13607 317 aa15.04■□□□□ -0
DDX28-201ENST00000332395 SURF2Q15527 256 aaPredicted RBP15.04■□□□□ -0
DDX28-201ENST00000332395 NSUN5P2Q63ZY6 315 aa15.04■□□□□ -0
DDX28-201ENST00000332395 NUFIP2Q7Z417 695 aaKnown RBP15.04■□□□□ -0
DDX28-201ENST00000332395 FBXL14Q8N1E6 418 aa15.04■□□□□ -0
DDX28-201ENST00000332395 OR51F2Q8NH61 342 aa15.04■□□□□ -0
DDX28-201ENST00000332395 SULT4A1Q9BR01 284 aa15.04■□□□□ -0
DDX28-201ENST00000332395 SLC25A32Q9H2D1 315 aa15.04■□□□□ -0
DDX28-201ENST00000332395 ANXA10Q9UJ72 324 aa15.04■□□□□ -0
DDX28-201ENST00000332395 EDARQ9UNE0 448 aa15.04■□□□□ -0
DDX28-201ENST00000332395 A0A0B4J2A0 478 aa15.03■□□□□ -0
DDX28-201ENST00000332395 RNF222A6NCQ9 220 aa15.03■□□□□ -0
DDX28-201ENST00000332395 ZNHIT1O43257 154 aa15.03■□□□□ -0
DDX28-201ENST00000332395 CRHP06850 196 aa15.03■□□□□ -0
DDX28-201ENST00000332395 COX5BP10606 129 aa15.03■□□□□ -0
DDX28-201ENST00000332395 CD79AP11912 226 aa15.03■□□□□ -0
DDX28-201ENST00000332395 ARG2P78540 354 aa15.03■□□□□ -0
DDX28-201ENST00000332395 FLI1Q01543 452 aaPredicted RBP15.03■□□□□ -0
DDX28-201ENST00000332395 SUMF1Q8NBK3 374 aa15.03■□□□□ -0
DDX28-201ENST00000332395 OR10AD1Q8NGE0 317 aa15.03■□□□□ -0
DDX28-201ENST00000332395 OR5T2Q8NGG2 359 aa15.03■□□□□ -0
DDX28-201ENST00000332395 OR56B2PQ8NGI1 322 aa15.03■□□□□ -0
DDX28-201ENST00000332395 THAP6Q8TBB0 222 aa15.03■□□□□ -0
DDX28-201ENST00000332395 CMSS1Q9BQ75 279 aaKnown RBP15.03■□□□□ -0
DDX28-201ENST00000332395 REPIN1Q9BWE0 567 aaKnown RBP15.03■□□□□ -0
DDX28-201ENST00000332395 DEFB127Q9H1M4 99 aa15.03■□□□□ -0
DDX28-201ENST00000332395 PRR13Q9NZ81 148 aa15.03■□□□□ -0
DDX28-201ENST00000332395 SHPKQ9UHJ6 478 aa15.03■□□□□ -0
DDX28-201ENST00000332395 PCP4L1A6NKN8 68 aa15.02■□□□□ -0
DDX28-201ENST00000332395 GALR2O43603 387 aaPredicted RBP15.02■□□□□ -0
DDX28-201ENST00000332395 ACOT7LQ6ZUV0 252 aa15.02■□□□□ -0
DDX28-201ENST00000332395 PIP4P1Q86T03 277 aa15.02■□□□□ -0
DDX28-201ENST00000332395 CALHM1Q8IU99 346 aa15.02■□□□□ -0
DDX28-201ENST00000332395 VRK1Q99986 396 aaPredicted RBP15.02■□□□□ -0
DDX28-201ENST00000332395 NMES1Q9C002 83 aa15.02■□□□□ -0
DDX28-201ENST00000332395 CHMP1AQ9HD42 196 aaPredicted RBP15.02■□□□□ -0
DDX28-201ENST00000332395 RAB18Q9NP72 206 aa15.02■□□□□ -0
DDX28-201ENST00000332395 MBD2Q9UBB5 411 aa15.02■□□□□ -0
DDX28-201ENST00000332395 ST3GAL6Q9Y274 331 aa15.02■□□□□ -0
DDX28-201ENST00000332395 KANTRA0A1W2PQU2 76 aa15.02□□□□□ -0.01
DDX28-201ENST00000332395 RPS2P15880 293 aaKnown RBP15.02□□□□□ -0.01
DDX28-201ENST00000332395 DTYMKP23919 212 aa15.02□□□□□ -0.01
DDX28-201ENST00000332395 RRADP55042 308 aa15.02□□□□□ -0.01
DDX28-201ENST00000332395 RAB1AP62820 205 aa15.02□□□□□ -0.01
DDX28-201ENST00000332395 UBA52P62987 128 aaKnown RBP15.02□□□□□ -0.01
DDX28-201ENST00000332395 ANKRD55Q3KP44 614 aa15.02□□□□□ -0.01
DDX28-201ENST00000332395 ZNF766Q5HY98 468 aa15.02□□□□□ -0.01
DDX28-201ENST00000332395 ZNF611Q8N823 705 aa15.02□□□□□ -0.01
DDX28-201ENST00000332395 ZNF2Q9BSG1 426 aaPredicted RBP15.02□□□□□ -0.01
DDX28-201ENST00000332395 PAPOLGQ9BWT3 736 aaKnown RBP15.02□□□□□ -0.01
DDX28-201ENST00000332395 A0A1B0GW55 424 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 RLN2P04090 185 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 FCGR3AP08637 254 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 DUX4L2P0CJ85 424 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 DUX4L3P0CJ86 424 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 DUX4L4P0CJ87 422 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 DUX4L5P0CJ88 424 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 DUX4L6P0CJ89 424 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 DUX4L7P0CJ90 424 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 PGAM2P15259 253 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 PSMB6P28072 239 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 OPRM1P35372 400 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 ARR3P36575 388 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 RNFT1Q5M7Z0 435 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 ST8SIA2Q92186 375 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 DYRK2Q92630 601 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 APOBEC3DQ96AK3 386 aaPredicted RBP15.01□□□□□ -0.01
DDX28-201ENST00000332395 LRRC46Q96FV0 321 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 DNTTIP1Q9H147 329 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 WDR13Q9H1Z4 485 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 DUX4Q9UBX2 424 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 C14orf166Q9Y224 244 aaKnown RBP15.01□□□□□ -0.01
DDX28-201ENST00000332395 BCL2L11O43521 198 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 ADAP1O75689 374 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 KNG1P01042 644 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 CD82P27701 267 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 ECI1P42126 302 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 CYCSP99999 105 aaKnown RBP15.01□□□□□ -0.01
DDX28-201ENST00000332395 BEX5Q5H9J7 111 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 BRICD5Q6PL45 260 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 MRPL21Q7Z2W9 205 aaKnown RBP15.01□□□□□ -0.01
DDX28-201ENST00000332395 WDYHV1Q96HA8 205 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 MICU1Q9BPX6 476 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 SPRR3Q9UBC9 169 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 PRSS50Q9UI38 385 aa15.01□□□□□ -0.01
DDX28-201ENST00000332395 TRGV5A0A0B4J1U4 118 aa15□□□□□ -0.01
DDX28-201ENST00000332395 FAM74A7A6NL05 159 aa15□□□□□ -0.01
DDX28-201ENST00000332395 OR5H8P0DN80 308 aa15□□□□□ -0.01
DDX28-201ENST00000332395 RBM11P57052 281 aaKnown RBP15□□□□□ -0.01
DDX28-201ENST00000332395 MALLQ13021 153 aa15□□□□□ -0.01
DDX28-201ENST00000332395 FAM74A3Q4VXF1 159 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms