RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 MAB21L2Q9Y586 359 aa11.6□□□□□ -0.55
LIMS1-201ENST00000332345 A0A0A6YYJ9 748 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 FCN3O75636 299 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 TOX4O94842 621 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 FSHBP01225 129 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 TFF1P04155 84 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 CD1AP06126 327 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 CHRM2P08172 466 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 CELP19835 753 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 ARF6P62330 175 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 SLC35A2P78381 396 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 BDH1Q02338 343 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 KISS1Q15726 138 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 SAXO1Q8IYX7 474 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 FAM58AQ8N1B3 248 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 BATF2Q8N1L9 274 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 BPIFB2Q8N4F0 458 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 CD177Q8N6Q3 437 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 ZFP41Q8N8Y5 198 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 ZSCAN4Q8NAM6 433 aaPredicted RBP11.59□□□□□ -0.55
LIMS1-201ENST00000332345 TMEM185AQ8NFB2 350 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 ZNF418Q8TF45 676 aaPredicted RBP11.59□□□□□ -0.55
LIMS1-201ENST00000332345 RGP1Q92546 391 aaPredicted RBP11.59□□□□□ -0.55
LIMS1-201ENST00000332345 WDFY2Q96P53 400 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 DCTN5Q9BTE1 182 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 Q9H521 79 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 DUSP21Q9H596 190 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 OR14J1Q9UGF5 321 aa11.59□□□□□ -0.55
LIMS1-201ENST00000332345 RRP15Q9Y3B9 282 aaKnown RBP11.59□□□□□ -0.55
LIMS1-201ENST00000332345 PNMA8CA0A1B0GUJ8 204 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 SPRY1O43609 319 aaPredicted RBP11.58□□□□□ -0.56
LIMS1-201ENST00000332345 RGS10O43665 173 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 ALDOBP05062 364 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 TMEM225BP0DP42 221 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 SELLP14151 372 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 CRHBPP24387 322 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 BPIFB3P59826 476 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 PPP3R1P63098 170 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 ACSM1Q08AH1 577 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 PDCD1Q15116 288 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 SPHARQ15513 63 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 Q499Y3 187 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 RBM48Q5RL73 367 aaKnown RBP11.58□□□□□ -0.56
LIMS1-201ENST00000332345 ZNF529Q6P280 563 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 USP43Q70EL4 1123 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 SATL1Q86VE3 508 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 CMTM4Q8IZR5 234 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 FGFRL1Q8N441 504 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 C8orf46Q8TAG6 207 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 TBC1D15Q8TC07 691 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 THRSPQ92748 146 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 EMG1Q92979 244 aaKnown RBP11.58□□□□□ -0.56
LIMS1-201ENST00000332345 RFT1Q96AA3 541 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 PGLYRP3Q96LB9 341 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 SPACA5Q96QH8 159 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 GPER1Q99527 375 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 PCGF1Q9BSM1 259 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 SUCNR1Q9BXA5 334 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 MS4A7Q9GZW8 240 aaPredicted RBP11.58□□□□□ -0.56
LIMS1-201ENST00000332345 FAM234AQ9H0X4 552 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 SEBOXQ9HB31 216 aaPredicted RBP11.58□□□□□ -0.56
LIMS1-201ENST00000332345 PAK1IP1Q9NWT1 392 aaPredicted RBP11.58□□□□□ -0.56
LIMS1-201ENST00000332345 CKLFQ9UBR5 152 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 BLOC1S6Q9UL45 172 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 KPTNQ9Y664 436 aa11.58□□□□□ -0.56
LIMS1-201ENST00000332345 TRBV23-1A0A0A0MS06 115 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 TRBV5-5A0A0J9YX44 114 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 A0A1W2PQ09 198 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 F8VVB4 439 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 F8VWA3 439 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 BCL3P20749 454 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 NPBWR2P48146 333 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 MED22Q15528 200 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 KLF17Q5JT82 389 aaPredicted RBP11.57□□□□□ -0.56
LIMS1-201ENST00000332345 GPR157Q5UAW9 335 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 C1orf122Q6ZSJ8 110 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 OR5D13Q8NGL4 314 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 TMEM158Q8WZ71 300 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 ZNF184Q99676 751 aaPredicted RBP11.57□□□□□ -0.56
LIMS1-201ENST00000332345 CCDC90BQ9GZT6 254 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 TMEM138Q9NPI0 162 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 TAS2R4Q9NYW5 299 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 ONECUT1Q9UBC0 465 aa11.57□□□□□ -0.56
LIMS1-201ENST00000332345 A0A1W2PPH5 198 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 K7N7A8 449 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 SH2D1BO14796 132 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 ANGPTL7O43827 346 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 GPX5O75715 221 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 KDM4BO94953 1096 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 TK1P04183 234 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 MMP9P14780 707 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 PRKACAP17612 351 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 EEF1B2P24534 225 aaKnown RBP11.56□□□□□ -0.56
LIMS1-201ENST00000332345 BDKRB2P30411 391 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 TGFBR2P37173 567 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 CEBPDP49716 269 aaPredicted RBP11.56□□□□□ -0.56
LIMS1-201ENST00000332345 BMXP51813 675 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 RPS11P62280 158 aaKnown RBP eCLIP11.56□□□□□ -0.56
LIMS1-201ENST00000332345 COL10A1Q03692 680 aa11.56□□□□□ -0.56
LIMS1-201ENST00000332345 ATRQ13535 2644 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms