RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 SLC26A10Q8NG04 563 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 LINC00052Q96N35 136 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 TPPP3Q9BW30 176 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 RYDENQ9NUL5 291 aaKnown RBP12.19□□□□□ -0.46
SPAST-201ENST00000315285 KLHDC2Q9Y2U9 406 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 OR7C2O60412 319 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 HOXD11P31277 338 aaPredicted RBP12.19□□□□□ -0.46
SPAST-201ENST00000315285 IL13RA2Q14627 380 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 RNF212Q495C1 297 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.19□□□□□ -0.46
SPAST-201ENST00000315285 SLC25A42Q86VD7 318 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 OR2I1PQ8NGU4 316 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 MRPS24Q96EL2 167 aaKnown RBP12.19□□□□□ -0.46
SPAST-201ENST00000315285 UNC13CQ8NB66 2214 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 FAM24AA6NFZ4 105 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 NGFP01138 241 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 ZNF250P15622 560 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 ZNF574Q6ZN55 896 aaPredicted RBP12.19□□□□□ -0.46
SPAST-201ENST00000315285 ZNF429Q86V71 674 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 RAB40CQ96S21 281 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 CACFD1Q9UGQ2 172 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 V9GYS6 101 aa12.19□□□□□ -0.46
SPAST-201ENST00000315285 CLN5O75503 358 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 CD1AP06126 327 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 IGHV4-34P06331 123 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 HNF1AP20823 631 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 TMEM33P57088 247 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 SSPNQ14714 243 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 CXorf67Q86X51 503 aaPredicted RBP12.18□□□□□ -0.46
SPAST-201ENST00000315285 ZNF426Q9BUY5 554 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 TAAR3PQ9P1P4 343 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 PILRAQ9UKJ1 303 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 VSIG8P0DPA2 414 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 MFRPQ9BY79 579 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 NMES1Q9C002 83 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 WDR13Q9H1Z4 485 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 PRR13Q9NZ81 148 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 K7EQM0 130 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 B3GALNT1O75752 331 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 WFDC8Q8IUA0 241 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 CCL2P13500 99 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 PHYHD1Q5SRE7 291 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 CD200R1LQ6Q8B3 271 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 BVESQ8NE79 360 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 OR2Y1Q8NGV0 311 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 ZNF721Q8TF20 911 aa12.18□□□□□ -0.46
SPAST-201ENST00000315285 MRPL22Q9NWU5 206 aaKnown RBP12.18□□□□□ -0.46
SPAST-201ENST00000315285 RGPD3A6NKT7 1758 aaPredicted RBP12.17□□□□□ -0.46
SPAST-201ENST00000315285 CEACAM6P40199 344 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 ERHP84090 104 aaKnown RBP12.17□□□□□ -0.46
SPAST-201ENST00000315285 TMEM267Q0VDI3 215 aaPredicted RBP12.17□□□□□ -0.46
SPAST-201ENST00000315285 SKA3Q8IX90 412 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 OCIAD1Q9NX40 245 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 PIKFYVEQ9Y2I7 2098 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 LINC00862A6NCI5 91 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 GPR37O15354 613 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 FABP1P07148 127 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 OR5G3P0C626 314 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 NQO2P16083 231 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 UBE2G2P60604 165 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 EIF3IQ13347 325 aaKnown RBP12.17□□□□□ -0.46
SPAST-201ENST00000315285 SMIM15Q7Z3B0 74 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 KDF1Q8NAX2 398 aaPredicted RBP12.17□□□□□ -0.46
SPAST-201ENST00000315285 OR5M9Q8NGP3 310 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 CHAC2Q8WUX2 184 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 ASAH2BP0C7U1 165 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 MEOX1P50221 254 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 DMWDQ09019 674 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 SF3B5Q9BWJ5 86 aaKnown RBP12.17□□□□□ -0.46
SPAST-201ENST00000315285 SLC35B3Q9H1N7 401 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 A0A1W2PR80 420 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 TRAF3IP2O43734 574 aaPredicted RBP12.17□□□□□ -0.46
SPAST-201ENST00000315285 CALCRP30988 508 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 KIR3DL2P43630 455 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 MICBQ29980 383 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 ZNF528Q3MIS6 628 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 AARDQ4LEZ3 155 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 ZNF766Q5HY98 468 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 OR2A2Q6IF42 318 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 DBX2Q6ZNG2 339 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 SAT2Q96F10 170 aaPredicted RBP12.17□□□□□ -0.46
SPAST-201ENST00000315285 GHITMQ9H3K2 345 aa12.17□□□□□ -0.46
SPAST-201ENST00000315285 BRWD3Q6RI45 1802 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 CACNA1IQ9P0X4 2223 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 C4orf51C9J302 202 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 MPLP40238 635 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 OR10V1Q8NGI7 309 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 PLPPR2Q96GM1 343 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 LURAP1Q96LR2 239 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 USB1Q9BQ65 265 aaKnown RBP12.16□□□□□ -0.46
SPAST-201ENST00000315285 CA10Q9NS85 328 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 UQCC1Q9NVA1 299 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 TO15178 435 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 IGF2P01344 180 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 RPS16P62249 146 aaKnown RBP12.16□□□□□ -0.46
SPAST-201ENST00000315285 COL13A1Q5TAT6 717 aaPredicted RBP12.16□□□□□ -0.46
SPAST-201ENST00000315285 DHRS13Q6UX07 377 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 M1APQ8TC57 530 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 C10orf35Q96D05 121 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms