RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ZNF519Q8TB69 540 aa11.49□□□□□ -0.57
TRIM35-201ENST00000305364 MED12Q93074 2177 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 SPRY1O43609 319 aaPredicted RBP11.48□□□□□ -0.57
TRIM35-201ENST00000305364 DBHP09172 617 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 CSNK1A1P48729 337 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 NOVA1P51513 510 aaKnown RBP11.48□□□□□ -0.57
TRIM35-201ENST00000305364 TMEM50BP56557 158 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 SUPT4H1P63272 117 aaKnown RBP11.48□□□□□ -0.57
TRIM35-201ENST00000305364 KHDC3LQ587J8 217 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 SPNS3Q6ZMD2 512 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 RLN3Q8WXF3 142 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 ASB10Q8WXI3 467 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 ANXA10Q9UJ72 324 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 BDP1A6H8Y1 2624 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 TERTO14746 1132 aaKnown RBP11.48□□□□□ -0.57
TRIM35-201ENST00000305364 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
TRIM35-201ENST00000305364 SERPINE2P07093 398 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 NDUFB7P17568 137 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 EWSR1Q01844 656 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRIM35-201ENST00000305364 FZD2Q14332 565 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.48□□□□□ -0.57
TRIM35-201ENST00000305364 SPTSSAQ969W0 71 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 MRPL38Q96DV4 380 aaKnown RBP11.48□□□□□ -0.57
TRIM35-201ENST00000305364 TRGC1P0CF51 173 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 CSRP1P21291 193 aaKnown RBP11.48□□□□□ -0.57
TRIM35-201ENST00000305364 CCNOP22674 350 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 RND3P61587 244 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 DMWDQ09019 674 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 ZNF66Q6ZN08 573 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 TMEM37Q8WXS4 190 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 SOX7Q9BT81 388 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 PLEKHF2Q9H8W4 249 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 STARD10Q9Y365 291 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 MMACHCQ9Y4U1 282 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 CACNA1EQ15878 2313 aa11.48□□□□□ -0.57
TRIM35-201ENST00000305364 A0A1W2PPQ1 181 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 PMS2P1A4D2B8 440 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 TK1P04183 234 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 HIST1H1BP16401 226 aaKnown RBP11.47□□□□□ -0.57
TRIM35-201ENST00000305364 EFNA3P52797 238 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 GFERP55789 205 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 GFI1BQ5VTD9 330 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 PLXDC1Q8IUK5 500 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 MALSU1Q96EH3 234 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 GPR87Q9BY21 358 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 ZNF576Q9H609 170 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 C19orf25Q9UFG5 118 aaPredicted RBP11.47□□□□□ -0.57
TRIM35-201ENST00000305364 KIF26AQ9ULI4 1882 aaPredicted RBP11.47□□□□□ -0.57
TRIM35-201ENST00000305364 TLCD2A6NGC4 264 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 H7BYZ3 331 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 HSPB6O14558 160 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 MBP02144 154 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 MMP7P09237 267 aaPredicted RBP11.47□□□□□ -0.57
TRIM35-201ENST00000305364 PRSS12P56730 875 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 GRB2P62993 217 aaKnown RBP11.47□□□□□ -0.57
TRIM35-201ENST00000305364 ZNF787Q6DD87 383 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 ZNF880Q6PDB4 577 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 TGIF2LXQ8IUE1 241 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 PTPMT1Q8WUK0 201 aaPredicted RBP11.47□□□□□ -0.57
TRIM35-201ENST00000305364 MRGPRFQ96AM1 343 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 HSF4Q9ULV5 492 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 K7EQS6 105 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 CNOT4O95628 575 aaKnown RBP11.47□□□□□ -0.57
TRIM35-201ENST00000305364 PGA4P0DJD7 388 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 PGA5P0DJD9 388 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 DUSP3P51452 185 aaPredicted RBP11.47□□□□□ -0.57
TRIM35-201ENST00000305364 RUNX1Q01196 453 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 FOXF1Q12946 379 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 HEPN1Q6WQI6 88 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 Q8WTZ3 238 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 SLC25A43Q8WUT9 341 aaPredicted RBP11.47□□□□□ -0.57
TRIM35-201ENST00000305364 RPUSD4Q96CM3 377 aaKnown RBP11.47□□□□□ -0.57
TRIM35-201ENST00000305364 THOC3Q96J01 351 aaKnown RBP11.47□□□□□ -0.57
TRIM35-201ENST00000305364 CHST5Q9GZS9 411 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 PLK3Q9H4B4 646 aa11.47□□□□□ -0.57
TRIM35-201ENST00000305364 TGOLN2O43493 480 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 GUSBP08236 651 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 MPZP25189 248 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 APOBEC1P41238 236 aaKnown RBP11.46□□□□□ -0.57
TRIM35-201ENST00000305364 ELLP55199 621 aaPredicted RBP11.46□□□□□ -0.57
TRIM35-201ENST00000305364 SRPXP78539 464 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 FAM185AQ8N0U4 392 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 BSCL2Q96G97 398 aaPredicted RBP11.46□□□□□ -0.57
TRIM35-201ENST00000305364 SMIM7Q9BQ49 75 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 FAM206AQ9NX38 181 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 OBP2AQ9NY56 170 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 OSGIN2Q9Y236 505 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 A0A0U1RQK1 487 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 OR2J2O76002 312 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 IGHV2-5P01817 119 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 LIAT1Q6ZQX7 453 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 GPR137CQ8N3F9 429 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 IL22RA1Q8N6P7 574 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 NTNG2Q96CW9 530 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 SLC2A9Q9NRM0 540 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 SLCO1B1Q9Y6L6 691 aa11.46□□□□□ -0.57
TRIM35-201ENST00000305364 OR8G1Q15617 311 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 MPV17LQ2QL34 196 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 OR52M1Q8NGK5 317 aa11.46□□□□□ -0.58
TRIM35-201ENST00000305364 PIGCQ92535 297 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms