RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 HTR1DP28221 377 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 SRP14P37108 136 aaKnown RBP6.82□□□□□ -1.32
SF3B3-201ENST00000302516 GUCA2AQ02747 115 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 FAM27D1Q5T7N8 215 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 LINC00696Q6ZRV3 163 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 OR10AD1Q8NGE0 317 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 SPACA5Q96QH8 159 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 HERVK_113P61574 105 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 INSM1Q01101 510 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-201ENST00000302516 BTLAQ7Z6A9 289 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 IGSF23A1L1A6 192 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 ZNF207O43670 478 aaKnown RBP6.82□□□□□ -1.32
SF3B3-201ENST00000302516 PITX3O75364 302 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 OR10J1P30954 320 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 FOXF1Q12946 379 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 NKG7Q16617 165 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 ZNF831Q5JPB2 1677 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 YRDCQ86U90 279 aaKnown RBP6.82□□□□□ -1.32
SF3B3-201ENST00000302516 ARHGEF17Q96PE2 2063 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-201ENST00000302516 CD1AP06126 327 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 AGFG1P52594 562 aaKnown RBP6.82□□□□□ -1.32
SF3B3-201ENST00000302516 HLA-BQ31612 363 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 MRGPREQ86SM8 312 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 MYOZ1Q9NP98 299 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-201ENST00000302516 LTB4R2Q9NPC1 389 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 CST7O76096 145 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 BMP5P22003 454 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 FDX2Q6P4F2 183 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 MENTQ9BUN1 341 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 TMEM9BQ9NQ34 198 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 MED29Q9NX70 200 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 MTCH2Q9Y6C9 303 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.82□□□□□ -1.32
SF3B3-201ENST00000302516 PRRG2O14669 202 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 LANCL1O43813 399 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 WNT3P56703 355 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 FBXL14Q8N1E6 418 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 OR52L2PQ8NGH6 319 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 OR4S2Q8NH73 311 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 KTI12Q96EK9 354 aaPredicted RBP6.82□□□□□ -1.32
SF3B3-201ENST00000302516 OPN4Q9UHM6 478 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 TRDCB7Z8K6 153 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 AREGP15514 252 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 CEACAM6P40199 344 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 LIAT1Q6ZQX7 453 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 TMEM230Q96A57 120 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 TECRQ9NZ01 308 aaKnown RBP6.81□□□□□ -1.32
SF3B3-201ENST00000302516 TMEM265A0A087WTH1 108 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 C11orf94C9JXX5 98 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 M0R1B8 84 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 M0R2Z0 102 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 EPPINO95925 133 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 CRHP06850 196 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 KISS1RQ969F8 398 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-201ENST00000302516 GRAMD2BQ96HH9 432 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 OR5AC1P0C628 307 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 ST6GAL1P15907 406 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 TMEM11P17152 192 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 RPL7P18124 248 aaKnown RBP6.81□□□□□ -1.32
SF3B3-201ENST00000302516 HOXA6P31267 233 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 SULT1A1P50225 295 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 STXBP6Q8NFX7 210 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 VSTM2AQ8TAG5 236 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 PERPQ96FX8 193 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 CACNG5Q9UF02 275 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 ALG1L2C9J202 215 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 PPOXP50336 477 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 NAAAQ02083 359 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 OR2B11Q5JQS5 317 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 MSRB3Q8IXL7 192 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 OR10V1Q8NGI7 309 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 TSPAN32Q96QS1 320 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 IER2Q9BTL4 223 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 VAX2Q9UIW0 290 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 SPRY1O43609 319 aaPredicted RBP6.81□□□□□ -1.32
SF3B3-201ENST00000302516 B3GALT4O96024 378 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 TMEM33P57088 247 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 IL11RAQ14626 422 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 SLC36A1Q7Z2H8 476 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 PDPNQ86YL7 162 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 OR2A5Q96R48 311 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 KMT2EQ8IZD2 1858 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 TCAPO15273 167 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 OGG1O15527 345 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 PIAS2O75928 621 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 ONECUT2O95948 504 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 HAND1O96004 215 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 SEMG1P04279 462 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 SLC25A5P05141 298 aaKnown RBP6.81□□□□□ -1.32
SF3B3-201ENST00000302516 VWA1Q6PCB0 445 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 OR10G4Q8NGN3 311 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 OR10G9Q8NGN4 311 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 OR10G7Q8NGN6 311 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 TMEM37Q8WXS4 190 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 LRRC3BQ96PB8 259 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 FBXO4Q9UKT5 387 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 A0A1B0GU03 582 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 LMO7DNF2Z398 122 aa6.81□□□□□ -1.32
SF3B3-201ENST00000302516 BCL3P20749 454 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms