RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 GALR1P47211 349 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 PRLHRP49683 370 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 DMWDQ09019 674 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 SPATA45Q537H7 98 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF784Q8NCA9 323 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-201ENST00000274071 OR4B1Q8NGF8 309 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF519Q8TB69 540 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 TIFAQ96CG3 184 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 RSPRY1Q96DX4 576 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 ABHD6Q9BV23 337 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 PLK3Q9H4B4 646 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 CALHM2Q9HA72 323 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 RXFP3Q9NSD7 469 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 ADAM29Q9UKF5 820 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 GAGE12BA1L429 117 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 GLOD5A6NK44 160 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 CATP04040 527 aaKnown RBP8.08□□□□□ -1.12
PDGFC-201ENST00000274071 RHOCP08134 193 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 DBHP09172 617 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 GNB3P16520 340 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 BLKP51451 505 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 DUSP3P51452 185 aaPredicted RBP8.08□□□□□ -1.12
PDGFC-201ENST00000274071 TAS2R30P59541 319 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 RHOAP61586 193 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 CNN3Q15417 329 aaKnown RBP8.08□□□□□ -1.12
PDGFC-201ENST00000274071 LINC01590Q5TEZ4 76 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 RTN4RL2Q86UN3 420 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 NIT1Q86X76 327 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 OR5AR1Q8NGP9 310 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 OR2I1PQ8NGU4 316 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 RBMXL1Q96E39 390 aaKnown RBP8.08□□□□□ -1.12
PDGFC-201ENST00000274071 MACROD1Q9BQ69 325 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 HSPB9Q9BQS6 159 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 HIPK2Q9H2X6 1198 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 ELOVL5Q9NYP7 299 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 LOC102723971A0A1B0GUV8 181 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 FAM230AA0A1W2PPH8 454 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 OR2AG2A6NM03 316 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 FIGNL2A6NMB9 653 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 XRCC2O43543 280 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 SEMA4FO95754 770 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 KLKB1P03952 638 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 MC5RP33032 325 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 NSDHLQ15738 373 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 GPR157Q5UAW9 335 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 CISD2Q8N5K1 135 aaKnown RBP8.08□□□□□ -1.12
PDGFC-201ENST00000274071 CMTM2Q8TAZ6 248 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 FNDC9Q8TBE3 224 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 OVCA2Q8WZ82 227 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 TMEM186Q96B77 213 aa8.08□□□□□ -1.12
PDGFC-201ENST00000274071 RYDENQ9NUL5 291 aaKnown RBP8.08□□□□□ -1.12
PDGFC-201ENST00000274071 NPIPB15A6NHN6 443 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-201ENST00000274071 B4DGG1 531 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 MSTNO14793 375 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 ONECUT2O95948 504 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 CORO1AP31146 461 aaKnown RBP8.07□□□□□ -1.12
PDGFC-201ENST00000274071 MNX1P50219 401 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-201ENST00000274071 PLAURQ03405 335 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 TMEM41BQ5BJD5 291 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 SAMD13Q5VXD3 122 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 TMEM225Q6GV28 225 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 Q7L0L9 218 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 OR52L2PQ8NGH6 319 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 VWCEQ96DN2 955 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 MRPL13Q9BYD1 178 aaKnown RBP8.07□□□□□ -1.12
PDGFC-201ENST00000274071 LPAR5Q9H1C0 372 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 ZNF160Q9HCG1 818 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 Q9N2K0 584 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 MANBALQ9NQG1 85 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 GPR84Q9NQS5 396 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 NUDT21O43809 227 aaKnown RBP8.07□□□□□ -1.12
PDGFC-201ENST00000274071 GNG7O60262 68 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 STC2O76061 302 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 SUMO1P63165 101 aaKnown RBP8.07□□□□□ -1.12
PDGFC-201ENST00000274071 DUSP2Q05923 314 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 SQSTM1Q13501 440 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 OR4A47Q6IF82 309 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 CENPVQ7Z7K6 275 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-201ENST00000274071 DTWD2Q8NBA8 298 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 STXBP6Q8NFX7 210 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 OR5B12Q96R08 314 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 C1orf123Q9NWV4 160 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 EHFQ9NZC4 300 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 GNG13Q9P2W3 67 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 HEATR5BQ9P2D3 2071 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 ODAMA1E959 279 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 GDF9O60383 454 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 TYMSP04818 313 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 SERPINA7P05543 415 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 TSPOP30536 169 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 VASPP50552 380 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-201ENST00000274071 PAFAH1B2P68402 229 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 ADIRFQ15847 76 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 TMEM64Q6YI46 380 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 LRRC69Q6ZNQ3 347 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 OR11L1Q8NGX0 322 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 GLYATL1Q969I3 302 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 PPP1R14AQ96A00 147 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 MRPL24Q96A35 216 aaKnown RBP8.07□□□□□ -1.12
PDGFC-201ENST00000274071 ARRDC3Q96B67 414 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms