RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 EHFQ9NZC4 300 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 MTCH1Q9NZJ7 389 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 ITGB1BP2Q9UKP3 347 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 WASF3Q9UPY6 502 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 DCHS1Q96JQ0 3298 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A10PA6NDY2 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A18PA6NE21 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A16PA6NEW6 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A20PA6NIJ5 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A8PA6NJQ4 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A7PA6NKC0 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A22PA8MWA6 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A12PA8MX19 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A5PA8MXJ8 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A23PA8MXZ1 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 F5H5P2 479 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 F8VVB4 439 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 F8VWA3 439 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 CRYABP02511 175 aaKnown RBP14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FCGR3AP08637 254 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A15PP0C7V4 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A13PP0C7W8 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A14PP0C7W9 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM90A24PP0C7X0 464 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 PMELP40967 661 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 NPY4RP50391 375 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FGF12P61328 243 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 PPP1CBP62140 327 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 NHLRC3Q5JS37 347 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 BRICD5Q6PL45 260 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 TMEM17Q86X19 198 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 BATF2Q8N1L9 274 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 MITD1Q8WV92 249 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 DYRK2Q92630 601 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 ZNF71Q9NQZ8 489 aaPredicted RBP14.24□□□□□ -0.13
CCDC40-201ENST00000269318 ANXA10Q9UJ72 324 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 FAM215AQ9Y5M1 114 aa14.24□□□□□ -0.13
CCDC40-201ENST00000269318 PTPRZ1P23471 2315 aaPredicted RBP14.24□□□□□ -0.13
CCDC40-201ENST00000269318 PLSCR5A0PG75 271 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 OR5B21A6NL26 309 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 FUT3P21217 361 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 FPR2P25090 351 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 CD34P28906 385 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 PDCD1Q15116 288 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 TMEM185AQ8NFB2 350 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 HS3ST6Q96QI5 342 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 TMPRSS13Q9BYE2 586 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 OR2J1Q9GZK6 312 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 OPN3Q9H1Y3 402 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-201ENST00000269318 LUZP4Q9P127 313 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 PROCRQ9UNN8 238 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 MGAQ8IWI9 3026 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 BOD1L1Q8NFC6 3051 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 MKRN2OSH3BPM6 223 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 SYNGR1O43759 233 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 RGS11O94810 467 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 CA6P23280 308 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 PER3P56645 1201 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 TAS2R31P59538 309 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 ERVS71-1P61550 626 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 GNG3P63215 75 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 IL13RA1P78552 427 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 GRK1Q15835 563 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 NDUFA5Q16718 116 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 C11orf88Q6PI97 169 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 CXorf67Q86X51 503 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-201ENST00000269318 SPACA3Q8IXA5 215 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 MKXQ8IYA7 352 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 C17orf78Q8N4C9 275 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 OR5M8Q8NGP6 311 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 TMEM230Q96A57 120 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 SLC23A1Q9UHI7 598 aa14.23□□□□□ -0.13
CCDC40-201ENST00000269318 OR5H14A6NHG9 310 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 WDR1O75083 606 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 CRHP06850 196 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 AKR1C4P17516 323 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 HLA-GP17693 338 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 HOXC12P31275 282 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 UCP2P55851 309 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 NHLH1Q02575 133 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 SRSF4Q08170 494 aaKnown RBP14.22□□□□□ -0.13
CCDC40-201ENST00000269318 P2RY6Q15077 328 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 ZNF660Q6AZW8 331 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-201ENST00000269318 SLC7A5P1Q8MH63 180 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 CCDC120Q96HB5 630 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 RTBDNQ9BSG5 229 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-201ENST00000269318 HEXA-AS1Q9H8Q6 139 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 NOP16Q9Y3C1 178 aaKnown RBP14.22□□□□□ -0.13
CCDC40-201ENST00000269318 PRSS44E7EML9 344 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 OR7C1O76099 320 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-201ENST00000269318 AGFG2O95081 481 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 DUS4LO95620 317 aaKnown RBP14.22□□□□□ -0.13
CCDC40-201ENST00000269318 PPP3CBP16298 524 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 OPRM1P35372 400 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 PTGER4P35408 488 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 TMEM128Q5BJH2 165 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 HAGHLQ6PII5 290 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-201ENST00000269318 Q6ZPA2 131 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 ZNF573Q86YE8 665 aa14.22□□□□□ -0.13
CCDC40-201ENST00000269318 SLC25A40Q8TBP6 338 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms