RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 FBXW5Q969U6 566 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 TINAGL1Q9GZM7 467 aaPredicted RBP13.94□□□□□ -0.18
TPM1-201ENST00000267996 C20orf85Q9H1P6 137 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 IFT46Q9NQC8 304 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 NPDC1Q9NQX5 325 aaPredicted RBP13.94□□□□□ -0.18
TPM1-201ENST00000267996 PLEKHJ1Q9NW61 149 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 ZNF581Q9P0T4 197 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 ITPR1Q14643 2758 aa13.94□□□□□ -0.18
TPM1-201ENST00000267996 C7orf66A4D0T2 115 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 H0YL77 283 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 CCL21O00585 134 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 PDCD6O75340 191 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 IGHV3-13P01766 116 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 ACAA1P09110 424 aaPredicted RBP13.93□□□□□ -0.18
TPM1-201ENST00000267996 ASCL1P50553 236 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 MEF2DQ14814 521 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 IGFBP7Q16270 282 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 ZNF782Q6ZMW2 699 aaPredicted RBP13.93□□□□□ -0.18
TPM1-201ENST00000267996 TMEM171Q8WVE6 324 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 SNAPC3Q92966 411 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 EMG1Q92979 244 aaKnown RBP13.93□□□□□ -0.18
TPM1-201ENST00000267996 HS3ST6Q96QI5 342 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 FZR1Q9UM11 496 aa13.93□□□□□ -0.18
TPM1-201ENST00000267996 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.92□□□□□ -0.18
TPM1-201ENST00000267996 HMX3A6NHT5 357 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 PTAFRP25105 342 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 CHRNB4P30926 498 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 MECP2P51608 486 aaKnown RBP13.92□□□□□ -0.18
TPM1-201ENST00000267996 RAB25P57735 213 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 ZNF154Q13106 437 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 NKAPLQ5M9Q1 402 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 TMEM108Q6UXF1 575 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 HOGA1Q86XE5 327 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 SPERTQ8NA61 448 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 SCCPDHQ8NBX0 429 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 OR51S1Q8NGJ8 323 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 OR13G1Q8NGZ3 307 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 CXXC4Q9H2H0 198 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 PLK3Q9H4B4 646 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 SLC2A8Q9NY64 477 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 POU2F3Q9UKI9 436 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 ACACBO00763 2458 aa13.92□□□□□ -0.18
TPM1-201ENST00000267996 IGLV3-9A0A075B6K5 115 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 ATP6V1G2-DDX39BF2Z307 99 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 M0QYG6 137 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 TPD52L2O43399 206 aaKnown RBP13.91□□□□□ -0.18
TPM1-201ENST00000267996 PEX14O75381 377 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 RHBDL1O75783 438 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 FUT3P21217 361 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 ERVK11-1P61568 191 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 RPS23P62266 143 aaKnown RBP13.91□□□□□ -0.18
TPM1-201ENST00000267996 RBMS2Q15434 407 aaKnown RBP13.91□□□□□ -0.18
TPM1-201ENST00000267996 MPV17LQ2QL34 196 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 C11orf91Q3C1V1 193 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 OR52W1Q6IF63 320 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 NUP37Q8NFH4 326 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 RADILQ96JH8 1075 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 SULT4A1Q9BR01 284 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 FAAP24Q9BTP7 215 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 TLNRD1Q9H1K6 362 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 GHITMQ9H3K2 345 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 RCC2Q9P258 522 aaKnown RBP13.91□□□□□ -0.18
TPM1-201ENST00000267996 POLDIP2Q9Y2S7 368 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 DPRXA6NFQ7 191 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 ADORA2A-AS1P86434 159 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 CD300CQ08708 224 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 IL13RA2Q14627 380 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 ACTBL2Q562R1 376 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 RNASE10Q5GAN6 216 aaKnown RBP13.91□□□□□ -0.18
TPM1-201ENST00000267996 LINC00596Q86U02 117 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 LRP11Q86VZ4 500 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 WFDC8Q8IUA0 241 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 BPIFB2Q8N4F0 458 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 SLC6A7Q99884 636 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 NKIRAS2Q9NYR9 191 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 AK3Q9UIJ7 227 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 FLVCR2Q9UPI3 526 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 PLEKHA6Q9Y2H5 1048 aa13.91□□□□□ -0.18
TPM1-201ENST00000267996 NOS1APO75052 506 aaPredicted RBP13.9□□□□□ -0.18
TPM1-201ENST00000267996 OR7C1O76099 320 aaPredicted RBP13.9□□□□□ -0.18
TPM1-201ENST00000267996 AMY2AP04746 511 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 PGA5P0DJD9 388 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 ZMYND11Q15326 602 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 VAX1Q5SQQ9 334 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 AKAP14Q86UN6 197 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 C11orf53Q8IXP5 236 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 Q8IYB0 196 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 FAM58AQ8N1B3 248 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 BATF2Q8N1L9 274 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 OR4K15Q8NH41 348 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 LILRB4Q8NHJ6 448 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 HPS1Q92902 700 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 ZNF488Q96MN9 340 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 NRIP2Q9BQI9 281 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 IL36RNQ9UBH0 155 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 NBASA2RRP1 2371 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 PLCE1Q9P212 2302 aa13.9□□□□□ -0.18
TPM1-201ENST00000267996 A0A0A6YYJ9 748 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 DISC1C4P0D8 188 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 H3BUI4 141 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms