RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 VASH2Q86V25 355 aa9.54□□□□□ -0.88
CD44-201ENST00000263398 TMPRSS13Q9BYE2 586 aa9.54□□□□□ -0.88
CD44-201ENST00000263398 TOLLIPQ9H0E2 274 aa9.54□□□□□ -0.88
CD44-201ENST00000263398 KIAA1456Q9P272 454 aa9.54□□□□□ -0.88
CD44-201ENST00000263398 ANXA10Q9UJ72 324 aa9.54□□□□□ -0.88
CD44-201ENST00000263398 POMT1Q9Y6A1 747 aa9.54□□□□□ -0.88
CD44-201ENST00000263398 OR2M5A3KFT3 312 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 MKRN2OSH3BPM6 223 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 M0R1X1 148 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 EML2O95834 649 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 KIR2DL1P43626 348 aaPredicted RBP9.53□□□□□ -0.88
CD44-201ENST00000263398 RPL7L1Q6DKI1 246 aaKnown RBP9.53□□□□□ -0.88
CD44-201ENST00000263398 UBALD1Q8TB05 177 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 RPS4Y2Q8TD47 263 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 POM121L2Q96KW2 1035 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 ZNFX1Q9P2E3 1918 aaKnown RBP9.53□□□□□ -0.88
CD44-201ENST00000263398 TRAV8-7A0A075B6U6 113 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 OR5B21A6NL26 309 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 ZNF17P17021 662 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 CTRB1P17538 263 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 MMP16P51512 607 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 TMEM33P57088 247 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 CTRB2Q6GPI1 263 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 ASB5Q8WWX0 329 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 RASL10BQ96S79 203 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 WDR13Q9H1Z4 485 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 MRPL22Q9NWU5 206 aaKnown RBP9.53□□□□□ -0.88
CD44-201ENST00000263398 NTMQ9P121 344 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 MMP24Q9Y5R2 645 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 ASXL3Q9C0F0 2248 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 C7orf66A4D0T2 115 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 FAM24AA6NFZ4 105 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 HRKO00198 91 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 ST8SIA5O15466 376 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 MOSPD3O75425 235 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 TMEM11P17152 192 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 HNF1AP20823 631 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 ASCL1P50553 236 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 SEZ6L2Q6UXD5 910 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 OR11H7Q8NGC8 314 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 OR10AC1Q8NH08 325 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 KCNK15Q9H427 330 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 PLA2G3Q9NZ20 509 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 FAM96BQ9Y3D0 163 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 HEXAP06865 529 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 CA6P23280 308 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 CEACAM6P40199 344 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 DEFB109BQ30KR1 87 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 OR5M9Q8NGP3 310 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 OR13G1Q8NGZ3 307 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 C10orf35Q96D05 121 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 PECRQ9BY49 303 aa9.53□□□□□ -0.88
CD44-201ENST00000263398 PHOX2AO14813 284 aa9.52□□□□□ -0.88
CD44-201ENST00000263398 TNFRSF1AP19438 455 aa9.52□□□□□ -0.88
CD44-201ENST00000263398 MPGP29372 298 aa9.52□□□□□ -0.88
CD44-201ENST00000263398 MDH2P40926 338 aaKnown RBP9.52□□□□□ -0.88
CD44-201ENST00000263398 GNB1P62873 340 aa9.52□□□□□ -0.88
CD44-201ENST00000263398 SLC38A11Q08AI6 406 aa9.52□□□□□ -0.88
CD44-201ENST00000263398 SSPNQ14714 243 aa9.52□□□□□ -0.88
CD44-201ENST00000263398 IGFBP7Q16270 282 aa9.52□□□□□ -0.88
CD44-201ENST00000263398 CLEC18BQ6UXF7 455 aa9.52□□□□□ -0.88
CD44-201ENST00000263398 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.52□□□□□ -0.88
CD44-201ENST00000263398 CCDC88CQ9P219 2028 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 PTP4A3O75365 173 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 B3GALNT1O75752 331 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 HRASP01112 189 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 FBP1P09467 338 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 PPP1CBP62140 327 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 DGAT2L6Q6ZPD8 337 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 SLC25A42Q86VD7 318 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 DEFB123Q8N688 67 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 OR10V1Q8NGI7 309 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 CRISPLD2Q9H0B8 497 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 CACNG5Q9UF02 275 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 MAP1LC3B2A6NCE7 125 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 CRYM-AS1A6NIL9 109 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 SOCS1O15524 211 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 C1QCP02747 245 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 RAB5AP20339 215 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 LPAR6P43657 344 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 LGALSLQ3ZCW2 172 aaPredicted RBP9.52□□□□□ -0.89
CD44-201ENST00000263398 D2HGDHQ8N465 521 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 RNF133Q8WVZ7 376 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 SF3B5Q9BWJ5 86 aaKnown RBP9.52□□□□□ -0.89
CD44-201ENST00000263398 MAP1LC3BQ9GZQ8 125 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 MPC1Q9Y5U8 109 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 SPTBP11277 2137 aa9.52□□□□□ -0.89
CD44-201ENST00000263398 LEUTXA8MZ59 168 aa9.51□□□□□ -0.89
CD44-201ENST00000263398 PATE4P0C8F1 98 aa9.51□□□□□ -0.89
CD44-201ENST00000263398 ACAA2P42765 397 aaKnown RBP9.51□□□□□ -0.89
CD44-201ENST00000263398 CNN1P51911 297 aaKnown RBP9.51□□□□□ -0.89
CD44-201ENST00000263398 STPG2Q8N412 459 aa9.51□□□□□ -0.89
CD44-201ENST00000263398 BVESQ8NE79 360 aa9.51□□□□□ -0.89
CD44-201ENST00000263398 LSM2Q9Y333 95 aaKnown RBP9.51□□□□□ -0.89
CD44-201ENST00000263398 TCRBV16S1A1N1A0A5B0 115 aa9.51□□□□□ -0.89
CD44-201ENST00000263398 TMEM218A2RU14 115 aa9.51□□□□□ -0.89
CD44-201ENST00000263398 C5orf67F2Z3F1 127 aa9.51□□□□□ -0.89
CD44-201ENST00000263398 LANCL1O43813 399 aa9.51□□□□□ -0.89
CD44-201ENST00000263398 COX7A2P2O60397 106 aa9.51□□□□□ -0.89
CD44-201ENST00000263398 ZNF66Q6ZN08 573 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms