RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 GEMIN2O14893 280 aaKnown RBP8.03□□□□□ -1.12
NIP7-202ENST00000254941 SSX4O60224 188 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 ZG16O60844 167 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 RHBDL1O75783 438 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 CLDN14O95500 239 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 ACAA1P09110 424 aaPredicted RBP8.03□□□□□ -1.12
NIP7-202ENST00000254941 GABRR1P24046 479 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 ACTBP60709 375 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 ACTG1P63261 375 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 MZT1Q08AG7 82 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 DAZAP2Q15038 168 aaPredicted RBP8.03□□□□□ -1.12
NIP7-202ENST00000254941 ARL6IP1Q15041 203 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 PNLIPRP3Q17RR3 467 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 ADAM5Q6NVV9 412 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 CCBE1Q6UXH8 406 aaPredicted RBP8.03□□□□□ -1.12
NIP7-202ENST00000254941 RTN4RL2Q86UN3 420 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 ITLN2Q8WWU7 325 aaPredicted RBP8.03□□□□□ -1.12
NIP7-202ENST00000254941 PLPPR2Q96GM1 343 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 C7orf50Q9BRJ6 194 aaKnown RBP8.03□□□□□ -1.12
NIP7-202ENST00000254941 TLNRD1Q9H1K6 362 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 HSF4Q9ULV5 492 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 CACNG2Q9Y698 323 aa8.03□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A10PA6NDY2 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A18PA6NE21 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A16PA6NEW6 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A20PA6NIJ5 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 ZSCAN5BA6NJL1 495 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A8PA6NJQ4 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A7PA6NKC0 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 CENPXA8MT69 81 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 SERPINE3A8MV23 424 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A22PA8MWA6 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A12PA8MX19 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A5PA8MXJ8 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A23PA8MXZ1 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 SHISA9B4DS77 424 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 CDIPTO14735 213 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 PTBP3O95758 552 aaKnown RBP8.02□□□□□ -1.12
NIP7-202ENST00000254941 GRPP07492 148 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A15PP0C7V4 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A13PP0C7W8 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A14PP0C7W9 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 FAM90A24PP0C7X0 464 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 SPNP16150 400 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 ERVK11-1P61568 191 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 ADIPOQQ15848 244 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 PCGF3Q3KNV8 242 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 OLFML2AQ68BL7 652 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 C11orf53Q8IXP5 236 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 DMRTC2Q8IXT2 367 aaPredicted RBP8.02□□□□□ -1.12
NIP7-202ENST00000254941 Q8IYB0 196 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 DUSP18Q8NEJ0 188 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 OR2Z1Q8NG97 314 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 ST8SIA4Q92187 359 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 PECRQ9BY49 303 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 PLK3Q9H4B4 646 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 TAAR3PQ9P1P4 343 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 ZNF107Q9UII5 783 aaPredicted RBP8.02□□□□□ -1.12
NIP7-202ENST00000254941 POU2F3Q9UKI9 436 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 ATP23Q9Y6H3 246 aa8.02□□□□□ -1.12
NIP7-202ENST00000254941 DYSFO75923 2080 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 KMT2BQ9UMN6 2715 aaPredicted RBP8.02□□□□□ -1.13
NIP7-202ENST00000254941 MEIS3P1A6NDR6 274 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 VSTM5A8MXK1 200 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 SSX5O60225 188 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 NOS1APO75052 506 aaPredicted RBP8.02□□□□□ -1.13
NIP7-202ENST00000254941 CA11O75493 328 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 PRB1P04280 392 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 CD3EP07766 207 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 CSF1P09603 554 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 OR4A8P0C604 315 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 PGA5P0DJD9 388 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 CHATP28329 748 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 SLC6A1P30531 599 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 BTCP35070 178 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 CD200P41217 278 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 KIR2DL3P43628 341 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 BEX5Q5H9J7 111 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 C6orf201Q7Z4U5 140 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 FAM58AQ8N1B3 248 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 CELF2-AS1Q8N7Q2 184 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 ENKURQ8TC29 256 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 NUDCD2Q8WVJ2 157 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 GTF3AQ92664 365 aaKnown RBP8.02□□□□□ -1.13
NIP7-202ENST00000254941 NEDD4LQ96PU5 975 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 NRIP2Q9BQI9 281 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 NPDC1Q9NQX5 325 aaPredicted RBP8.02□□□□□ -1.13
NIP7-202ENST00000254941 PLEKHJ1Q9NW61 149 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 ZNF581Q9P0T4 197 aa8.02□□□□□ -1.13
NIP7-202ENST00000254941 USP9XQ93008 2570 aaPredicted RBP8.02□□□□□ -1.13
NIP7-202ENST00000254941 SPTAN1Q13813 2472 aaKnown RBP8.01□□□□□ -1.13
NIP7-202ENST00000254941 DOPEY1Q5JWR5 2465 aa8.01□□□□□ -1.13
NIP7-202ENST00000254941 IGHV3-64DA0A0J9YX35 117 aa8.01□□□□□ -1.13
NIP7-202ENST00000254941 FAM240BA0A1B0GVZ2 78 aa8.01□□□□□ -1.13
NIP7-202ENST00000254941 SIAH2O43255 324 aa8.01□□□□□ -1.13
NIP7-202ENST00000254941 TPD52L2O43399 206 aaKnown RBP8.01□□□□□ -1.13
NIP7-202ENST00000254941 OR7C1O76099 320 aaPredicted RBP8.01□□□□□ -1.13
NIP7-202ENST00000254941 PRKACAP17612 351 aa8.01□□□□□ -1.13
NIP7-202ENST00000254941 GNG2P59768 71 aa8.01□□□□□ -1.13
NIP7-202ENST00000254941 MPPED2Q15777 294 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms