RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 FCGR2CP31995 323 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 SULT1A2P50226 295 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 PCBD1P61457 104 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 TMEM88Q6PEY1 159 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 WDR5BQ86VZ2 330 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 ZNF100Q8IYN0 542 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 OR10AD1Q8NGE0 317 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 MRPL24Q96A35 216 aaKnown RBP14.25□□□□□ -0.13
HOXD3-201ENST00000249440 GALNT14Q96FL9 552 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 BCO1Q9HAY6 547 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 SLC7A11Q9UPY5 501 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 LSM5Q9Y4Y9 91 aaKnown RBP14.25□□□□□ -0.13
HOXD3-201ENST00000249440 A0A0G2JMM0 328 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 A0A1W2PPB8 328 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 A0A1W2PRS3 328 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 KIR3DP1A8MWS1 328 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 RCC1P18754 421 aaPredicted RBP14.25□□□□□ -0.13
HOXD3-201ENST00000249440 FUT6P51993 359 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 PRSS12P56730 875 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 TMEM33P57088 247 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 RIPPLY2Q5TAB7 128 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 C1orf210Q8IVY1 113 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 RTN4IP1Q8WWV3 396 aaPredicted RBP14.25□□□□□ -0.13
HOXD3-201ENST00000249440 WNT2BQ93097 391 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 ADAT1Q9BUB4 502 aaKnown RBP14.25□□□□□ -0.13
HOXD3-201ENST00000249440 NAA60Q9H7X0 242 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 PLEKHA2Q9HB19 425 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 CACNA1HO95180 2353 aa14.25□□□□□ -0.13
HOXD3-201ENST00000249440 FAM3AP98173 230 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 CEACAM16Q2WEN9 425 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 TMEM268Q5VZI3 342 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 NRIP2Q9BQI9 281 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 OR2H1Q9GZK4 316 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 IL36GQ9NZH8 169 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 ZNF581Q9P0T4 197 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 FBXL17Q9UF56 701 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 ST3GAL6Q9Y274 331 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 hCG_38984A0A1B0GV85 526 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 SCGB1D2O95969 90 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 LPAR6P43657 344 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 PDZK1IP1Q13113 114 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 PIGYQ3MUY2 71 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 ABLIM2Q6H8Q1 611 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 DHRS7BQ6IAN0 325 aaPredicted RBP14.24□□□□□ -0.13
HOXD3-201ENST00000249440 FBXL14Q8N1E6 418 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 OR10D3Q8NH80 312 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 OR2V1Q8NHB1 315 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 TECTBQ96PL2 329 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 SUCNR1Q9BXA5 334 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 PARP11Q9NR21 331 aa14.24□□□□□ -0.13
HOXD3-201ENST00000249440 IGKV1-12A0A0C4DH73 117 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 E5RGE8 158 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 FBXO24O75426 580 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 TRAPPC6AO75865 159 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 CER1O95813 267 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 IGKV1D-12P01611 117 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 OR5AC1P0C628 307 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 MUC1P15941 1255 aaPredicted RBP14.23□□□□□ -0.13
HOXD3-201ENST00000249440 TCN2P20062 427 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 NME2P22392 152 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 TMEM187Q14656 261 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 SLC22A25Q6T423 547 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 NAXEQ8NCW5 288 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 ADGRG7Q96K78 797 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 SYT3Q9BQG1 590 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 ZNF286AQ9HBT8 521 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 RCC2Q9P258 522 aaKnown RBP14.23□□□□□ -0.13
HOXD3-201ENST00000249440 AMDHD2Q9Y303 409 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 NSG2Q9Y328 171 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 PATE3B3GLJ2 98 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 LAMTOR5O43504 91 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 RFPL3SP0C7P2 107 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 PVALBP20472 110 aaPredicted RBP14.23□□□□□ -0.13
HOXD3-201ENST00000249440 OTX2P32243 289 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 F2RL1P55085 397 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 FXYD4P59646 89 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 ZNF92Q03936 586 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 SP6Q3SY56 376 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 LRTM2Q8N967 370 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 WNT5BQ9H1J7 359 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 ZFP57Q9NU63 452 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 FAM96BQ9Y3D0 163 aa14.23□□□□□ -0.13
HOXD3-201ENST00000249440 RNASEK-C17orf49H0YIS7 233 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 XRCC2O43543 280 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 MALLQ13021 153 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 OR8B8Q15620 311 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 HFEQ30201 348 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 WIPI1Q5MNZ9 446 aaPredicted RBP14.22□□□□□ -0.13
HOXD3-201ENST00000249440 PLCXD3Q63HM9 321 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 BRICD5Q6PL45 260 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 PPP1R32Q7Z5V6 425 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 CBLN2Q8IUK8 224 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 UBAC2Q8NBM4 344 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 PIGCQ92535 297 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 DYRK2Q92630 601 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 SMOC1Q9H4F8 434 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 GPR35Q9HC97 309 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 SLC2A9Q9NRM0 540 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 PRELID3BQ9Y3B1 194 aa14.22□□□□□ -0.13
HOXD3-201ENST00000249440 ZNF816-ZNF321PA0A0X1KG74 233 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms