RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 IL2RAP01589 272 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 EDN3P14138 238 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 RPA2P15927 270 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 S100A12P80511 92 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 PNLIPRP3Q17RR3 467 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 UNQ6126/PRO20091Q6UXV3 157 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 BPIFCQ8NFQ6 507 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 TAS2R3Q9NYW6 316 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 GPR132Q9UNW8 380 aa13.68□□□□□ -0.22
LRFN1-201ENST00000248668 IGKV1-12A0A0C4DH73 117 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 TUBAL3A6NHL2 446 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 OR6C65A6NJZ3 312 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 EIF3GO75821 320 aaKnown RBP eCLIP13.67□□□□□ -0.22
LRFN1-201ENST00000248668 DUS4LO95620 317 aaKnown RBP13.67□□□□□ -0.22
LRFN1-201ENST00000248668 IGKV1D-12P01611 117 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 GLI4P10075 376 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 CD79AP11912 226 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 TBPP20226 339 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 MPGP29372 298 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 RBP2P50120 134 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 FAM3AP98173 230 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 AADACL3Q5VUY0 350 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 CDC6Q99741 560 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 NUDT16L1Q9BRJ7 211 aaKnown RBP13.67□□□□□ -0.22
LRFN1-201ENST00000248668 METTL9Q9H1A3 318 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 C12orf49Q9H741 205 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 ZNF629Q9UEG4 869 aaPredicted RBP13.67□□□□□ -0.22
LRFN1-201ENST00000248668 OTOGLQ3ZCN5 2332 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 F12P00748 615 aaPredicted RBP13.67□□□□□ -0.22
LRFN1-201ENST00000248668 SFTPBP07988 381 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 HOXB5P09067 269 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 PTAFRP25105 342 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 CLDN18P56856 261 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 SPEM2Q0P670 501 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 ANKRD55Q3KP44 614 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 Q3ZCU0 254 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 TMPRSS7Q7RTY8 843 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 FBXL14Q8N1E6 418 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 DEFB127Q9H1M4 99 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 BIN3Q9NQY0 253 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 B4GALT7Q9UBV7 327 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 MIOXQ9UGB7 285 aa13.67□□□□□ -0.22
LRFN1-201ENST00000248668 ZNF503-AS2A6NEH8 195 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 C3orf80F5H4A9 247 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 MSTNO14793 375 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 CD8AP01732 235 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 S100A6P06703 90 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 TMEM128Q5BJH2 165 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 VAX1Q5SQQ9 334 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 HSD17B13Q7Z5P4 300 aaPredicted RBP13.66□□□□□ -0.22
LRFN1-201ENST00000248668 ARRDC1Q8N5I2 433 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 Q96M66 194 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 RTBDNQ9BSG5 229 aaPredicted RBP13.66□□□□□ -0.22
LRFN1-201ENST00000248668 CRIM1Q9NZV1 1036 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 GSKIPQ9P0R6 139 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 LIPGQ9Y5X9 500 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 PRR14LQ5THK1 2151 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 RNF222A6NCQ9 220 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 ZNF850A8MQ14 1090 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 FOXI3A8MTJ6 420 aaPredicted RBP13.66□□□□□ -0.22
LRFN1-201ENST00000248668 ACAA1P09110 424 aaPredicted RBP13.66□□□□□ -0.22
LRFN1-201ENST00000248668 SPP1P10451 314 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 THAP6Q8TBB0 222 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 TOMM40LQ969M1 308 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 ZNF2Q9BSG1 426 aaPredicted RBP13.66□□□□□ -0.22
LRFN1-201ENST00000248668 GHRLQ9UBU3 117 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 AK3Q9UIJ7 227 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 KANTRA0A1W2PQU2 76 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 C5orf49A4QMS7 147 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 ARGFXA6NJG6 315 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 BTF3P20290 206 aaKnown RBP13.66□□□□□ -0.22
LRFN1-201ENST00000248668 MPZP25189 248 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 SUPT4H1P63272 117 aaKnown RBP13.66□□□□□ -0.22
LRFN1-201ENST00000248668 PLA2G2CQ5R387 149 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 OR5AP2Q8NGF4 316 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 SULT4A1Q9BR01 284 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 DNTTIP1Q9H147 329 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 METTL8Q9H825 291 aaKnown RBP13.66□□□□□ -0.22
LRFN1-201ENST00000248668 CHMP1AQ9HD42 196 aaPredicted RBP13.66□□□□□ -0.22
LRFN1-201ENST00000248668 ABI3Q9P2A4 366 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 TNFSF18Q9UNG2 199 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 CSAG2Q9Y5P2 127 aa13.66□□□□□ -0.22
LRFN1-201ENST00000248668 SYNGR4O95473 234 aa13.65□□□□□ -0.22
LRFN1-201ENST00000248668 CNN3Q15417 329 aaKnown RBP13.65□□□□□ -0.22
LRFN1-201ENST00000248668 TMEM17Q86X19 198 aa13.65□□□□□ -0.22
LRFN1-201ENST00000248668 EMG1Q92979 244 aaKnown RBP13.65□□□□□ -0.22
LRFN1-201ENST00000248668 FIGNL2A6NMB9 653 aa13.65□□□□□ -0.22
LRFN1-201ENST00000248668 AGTR1P30556 359 aa13.65□□□□□ -0.22
LRFN1-201ENST00000248668 MEOX1P50221 254 aa13.65□□□□□ -0.22
LRFN1-201ENST00000248668 FXYD4P59646 89 aa13.65□□□□□ -0.22
LRFN1-201ENST00000248668 SNRPEP62304 92 aaKnown RBP13.65□□□□□ -0.22
LRFN1-201ENST00000248668 CALHM1Q8IU99 346 aa13.65□□□□□ -0.22
LRFN1-201ENST00000248668 ZSCAN4Q8NAM6 433 aaPredicted RBP13.65□□□□□ -0.22
LRFN1-201ENST00000248668 DCUN1D4Q92564 292 aa13.65□□□□□ -0.22
LRFN1-201ENST00000248668 TSNAXQ99598 290 aaKnown RBP13.65□□□□□ -0.22
LRFN1-201ENST00000248668 hCG_38984A0A1B0GV85 526 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 SERPINE3A8MV23 424 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 MMP7P09237 267 aaPredicted RBP13.65□□□□□ -0.23
LRFN1-201ENST00000248668 ALDH3B1P43353 468 aa13.65□□□□□ -0.23
LRFN1-201ENST00000248668 PCBD1P61457 104 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms