RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 HIST1H2BNQ99877 126 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 HIST1H2BMQ99879 126 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 C11orf1Q9H5F2 150 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 NECAP2Q9NVZ3 263 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 RCL1Q9Y2P8 373 aaKnown RBP12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 WDR87Q6ZQQ6 2873 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 A0A1W2PPC4 97 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 BTBD17A6NE02 478 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 DHRS3O75911 302 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 LY86O95711 162 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 FBLP22087 321 aaKnown RBP12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 TAGLN2P37802 199 aaKnown RBP12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 EWSR1Q01844 656 aaKnown RBP eCLIP12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 HIST3H3Q16695 136 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 HAGHQ16775 308 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 ZNF674Q2M3X9 581 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 ABCA11PQ4W5N1 156 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 ZNF343Q6P1L6 599 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 SPNS3Q6ZMD2 512 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 Q6ZSR3 168 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 D2HGDHQ8N465 521 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 OR6X1Q8NH79 312 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 LMX1AQ8TE12 382 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 REEP6Q96HR9 211 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 NELFAQ9H3P2 528 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 ELL3Q9HB65 397 aaPredicted RBP12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 KIAA1456Q9P272 454 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 A0A0U1RQV5 110 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 CXorf65A6NEN9 183 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 HEXBP07686 556 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 FAHP16930 419 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 ERVFRD-1P60508 538 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 RND3P61587 244 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 TSPO2Q5TGU0 170 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 CARD17Q5XLA6 110 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 ZNF784Q8NCA9 323 aaPredicted RBP12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 OR4D5Q8NGN0 318 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 OR10D4PQ8NGN7 298 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 RLN3Q8WXF3 142 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 GTF3AQ92664 365 aaKnown RBP12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 SLC2A9Q9NRM0 540 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 GFOD1Q9NXC2 390 aa12.2□□□□□ -0.46
SCNN1A-201ENST00000228916 NCOA6Q14686 2063 aaPredicted RBP12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 DTYMKP23919 212 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 TMEM176BQ3YBM2 270 aaPredicted RBP12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 SLC25A53Q5H9E4 307 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 Q6ZS52 159 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 LGI3Q8N145 548 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 FBXL14Q8N1E6 418 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 SIRT7Q9NRC8 400 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 UFSP2Q9NUQ7 469 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 ASXL3Q9C0F0 2248 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 CCDC187A0A096LP49 1063 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 QDPRP09417 244 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 ATP6V0CP27449 155 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 RRADP55042 308 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 UBE2KP61086 200 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 SHISA6Q6ZSJ9 500 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 HIST3H2BBQ8N257 126 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 DEFB119Q8N690 84 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 OR13D1Q8NGV5 346 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 OR2G3Q8NGZ4 309 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 ABHD14AQ9BUJ0 271 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 ANGPTL4Q9BY76 406 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 AK3Q9UIJ7 227 aa12.19□□□□□ -0.46
SCNN1A-201ENST00000228916 IGHV3-20A0A0C4DH32 117 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 SHISA7A6NL88 538 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 ZNF850A8MQ14 1090 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 H0YL77 283 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 F10P00742 488 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 DLK1P80370 383 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 ZNF266Q14584 549 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 COL19A1Q14993 1142 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 C1orf189Q5VU69 101 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 OR1L3Q8NH93 324 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 PIGTQ969N2 578 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 MRGPRX4Q96LA9 322 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 FAAP24Q9BTP7 215 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 NXT1Q9UKK6 140 aaKnown RBP12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 RFNGQ9Y644 331 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 HS3ST3B1Q9Y662 390 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 ZNF587BE7ETH6 402 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 ZNF205O95201 554 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 KLK2P20151 261 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 SFTPDP35247 375 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 DEFB133Q30KQ1 61 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 PHLDA2Q53GA4 152 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 OR2C3Q8N628 320 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 POC1BQ8TC44 478 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 RNF138Q8WVD3 245 aa12.18□□□□□ -0.46
SCNN1A-201ENST00000228916 ELOA3CA0A087WX78 387 aaPredicted RBP12.17□□□□□ -0.46
SCNN1A-201ENST00000228916 CDRT15L2A8MXV6 281 aa12.17□□□□□ -0.46
SCNN1A-201ENST00000228916 ZNF814B7Z6K7 855 aa12.17□□□□□ -0.46
SCNN1A-201ENST00000228916 SOD3P08294 240 aa12.17□□□□□ -0.46
SCNN1A-201ENST00000228916 EN2P19622 333 aaPredicted RBP12.17□□□□□ -0.46
SCNN1A-201ENST00000228916 OPRM1P35372 400 aa12.17□□□□□ -0.46
SCNN1A-201ENST00000228916 RBP2P50120 134 aa12.17□□□□□ -0.46
SCNN1A-201ENST00000228916 ASCL1P50553 236 aa12.17□□□□□ -0.46
SCNN1A-201ENST00000228916 GNMTQ14749 295 aa12.17□□□□□ -0.46
SCNN1A-201ENST00000228916 PLPPR5Q32ZL2 321 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms