RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 EIF5AP63241 154 aaKnown RBP19.26■□□□□ 0.67
CCDC9-201ENST00000221922 PSG4Q00888 419 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 OR1C1Q15619 314 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 NRN1LQ496H8 165 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 PLXDC2Q6UX71 529 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 AKR7LQ8NHP1 331 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 Q96M66 194 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 DECR2Q9NUI1 292 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 MCTS1Q9ULC4 181 aaKnown RBP19.26■□□□□ 0.67
CCDC9-201ENST00000221922 AHCTF1Q8WYP5 2266 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 IGKV1D-8A0A087WSZ0 117 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 F8W036 122 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 FARS2O95363 451 aaKnown RBP19.26■□□□□ 0.67
CCDC9-201ENST00000221922 HOXB5P09067 269 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 BLOC1S1P78537 153 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 LHFPL2Q6ZUX7 228 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 ZNF100Q8IYN0 542 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 ABHD3Q8WU67 409 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 SEC11CQ9BY50 192 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 TLNRD1Q9H1K6 362 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 C1orf123Q9NWV4 160 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 IL17BQ9UHF5 180 aa19.26■□□□□ 0.67
CCDC9-201ENST00000221922 GALR2O43603 387 aaPredicted RBP19.25■□□□□ 0.67
CCDC9-201ENST00000221922 HGFACQ04756 655 aa19.25■□□□□ 0.67
CCDC9-201ENST00000221922 RBM39Q14498 530 aaKnown RBP19.25■□□□□ 0.67
CCDC9-201ENST00000221922 DHRS7BQ6IAN0 325 aaPredicted RBP19.25■□□□□ 0.67
CCDC9-201ENST00000221922 C6orf201Q7Z4U5 140 aa19.25■□□□□ 0.67
CCDC9-201ENST00000221922 ZNF845Q96IR2 970 aaPredicted RBP19.25■□□□□ 0.67
CCDC9-201ENST00000221922 WNT5BQ9H1J7 359 aa19.25■□□□□ 0.67
CCDC9-201ENST00000221922 UQCC1Q9NVA1 299 aa19.25■□□□□ 0.67
CCDC9-201ENST00000221922 GSKIPQ9P0R6 139 aa19.25■□□□□ 0.67
CCDC9-201ENST00000221922 PRELID3BQ9Y3B1 194 aa19.25■□□□□ 0.67
CCDC9-201ENST00000221922 IGKV3D-15A0A087WSY6 115 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 KNG1P01042 644 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 HKR1P10072 659 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 RSU1Q15404 277 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 HFEQ30201 348 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 TMEM200AQ86VY9 491 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 CNTNAP3Q9BZ76 1288 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 ZNF701Q9NV72 531 aaPredicted RBP19.24■□□□□ 0.67
CCDC9-201ENST00000221922 PLEKHJ1Q9NW61 149 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 CTSDP07339 412 aaPredicted RBP19.24■□□□□ 0.67
CCDC9-201ENST00000221922 ZNF708P17019 499 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 RBMXP38159 391 aaKnown RBP19.24■□□□□ 0.67
CCDC9-201ENST00000221922 RBP2P50120 134 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 S100A10P60903 97 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 SPEM2Q0P670 501 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 RSPO4Q2I0M5 234 aaPredicted RBP19.24■□□□□ 0.67
CCDC9-201ENST00000221922 TMEM42Q69YG0 159 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 EIF5AL1Q6IS14 154 aaKnown RBP19.24■□□□□ 0.67
CCDC9-201ENST00000221922 BORCS8Q96FH0 119 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 OR2S2Q9NQN1 319 aa19.24■□□□□ 0.67
CCDC9-201ENST00000221922 SERPINA5P05154 406 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 SFTPBP07988 381 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 GABRR1P24046 479 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 LHX2P50458 406 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 RPUSD3Q6P087 351 aaKnown RBP19.23■□□□□ 0.67
CCDC9-201ENST00000221922 TMEM88Q6PEY1 159 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 HAGHLQ6PII5 290 aaPredicted RBP19.23■□□□□ 0.67
CCDC9-201ENST00000221922 FER1L6-AS2Q96M78 137 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 ZNF2Q9BSG1 426 aaPredicted RBP19.23■□□□□ 0.67
CCDC9-201ENST00000221922 HES7Q9BYE0 225 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 LINC00470Q9BZP3 86 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 TREM1Q9NP99 234 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 NOSIPQ9Y314 301 aaKnown RBP19.23■□□□□ 0.67
CCDC9-201ENST00000221922 TTC28Q96AY4 2481 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 FAM230AA0A1W2PPH8 454 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 H7C2Y5 167 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 SNAPINO95295 136 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 NRASP01111 189 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 PATE4P0C8F1 98 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 CAV2P51636 162 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 TRIP6Q15654 476 aaKnown RBP19.23■□□□□ 0.67
CCDC9-201ENST00000221922 RPL7L1Q6DKI1 246 aaKnown RBP19.23■□□□□ 0.67
CCDC9-201ENST00000221922 FAM219AQ8IW50 185 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 SKA3Q8IX90 412 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 SPAG16Q8N0X2 631 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 TECTBQ96PL2 329 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 ADAT1Q9BUB4 502 aaKnown RBP19.23■□□□□ 0.67
CCDC9-201ENST00000221922 TAF9BQ9HBM6 251 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 ACKR4Q9NPB9 350 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 ATPIF1Q9UII2 106 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 TUBD1Q9UJT1 453 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 HSF4Q9ULV5 492 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 EDARQ9UNE0 448 aa19.23■□□□□ 0.67
CCDC9-201ENST00000221922 MSTNO14793 375 aa19.22■□□□□ 0.67
CCDC9-201ENST00000221922 XRCC2O43543 280 aa19.22■□□□□ 0.67
CCDC9-201ENST00000221922 MRPL33O75394 65 aaKnown RBP19.22■□□□□ 0.67
CCDC9-201ENST00000221922 IAH1Q2TAA2 248 aaPredicted RBP19.22■□□□□ 0.67
CCDC9-201ENST00000221922 ASCL4Q6XD76 172 aa19.22■□□□□ 0.67
CCDC9-201ENST00000221922 SGPP2Q8IWX5 399 aa19.22■□□□□ 0.67
CCDC9-201ENST00000221922 IQCF2Q8IXL9 164 aa19.22■□□□□ 0.67
CCDC9-201ENST00000221922 SUMF1Q8NBK3 374 aa19.22■□□□□ 0.67
CCDC9-201ENST00000221922 WNT2BQ93097 391 aa19.22■□□□□ 0.67
CCDC9-201ENST00000221922 TTTY12Q9BZ98 90 aa19.22■□□□□ 0.67
CCDC9-201ENST00000221922 RHOFQ9HBH0 211 aa19.22■□□□□ 0.67
CCDC9-201ENST00000221922 PARPBPQ9NWS1 579 aa19.22■□□□□ 0.67
CCDC9-201ENST00000221922 KLF2Q9Y5W3 355 aaPredicted RBP19.22■□□□□ 0.67
CCDC9-201ENST00000221922 hCG_38984A0A1B0GV85 526 aa19.21■□□□□ 0.67
CCDC9-201ENST00000221922 CRYM-AS1A6NIL9 109 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms