RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ANKRD30BLA7E2S9 258 aa25.51■■□□□ 1.67
PABPN1-201ENST00000216727 PRSS44E7EML9 344 aa25.51■■□□□ 1.67
PABPN1-201ENST00000216727 CXCL2P19875 107 aa25.51■■□□□ 1.67
PABPN1-201ENST00000216727 VAMP1P23763 118 aa25.51■■□□□ 1.67
PABPN1-201ENST00000216727 NPBWR2P48146 333 aa25.51■■□□□ 1.67
PABPN1-201ENST00000216727 CLEC4MQ9H2X3 399 aaPredicted RBP25.51■■□□□ 1.67
PABPN1-201ENST00000216727 ZNF732B4DXR9 585 aa25.5■■□□□ 1.67
PABPN1-201ENST00000216727 PROB1E7EW31 1015 aa25.5■■□□□ 1.67
PABPN1-201ENST00000216727 EIF2S3P41091 472 aaKnown RBP25.5■■□□□ 1.67
PABPN1-201ENST00000216727 HTR2BP41595 481 aa25.5■■□□□ 1.67
PABPN1-201ENST00000216727 MRPL49Q13405 166 aaKnown RBP25.5■■□□□ 1.67
PABPN1-201ENST00000216727 CNEP1R1Q8N9A8 125 aa25.5■■□□□ 1.67
PABPN1-201ENST00000216727 ZNF680Q8NEM1 530 aa25.5■■□□□ 1.67
PABPN1-201ENST00000216727 OR5P3Q8WZ94 311 aa25.5■■□□□ 1.67
PABPN1-201ENST00000216727 LYZL6O75951 148 aa25.49■■□□□ 1.67
PABPN1-201ENST00000216727 FCGR3AP08637 254 aa25.49■■□□□ 1.67
PABPN1-201ENST00000216727 FUT3P21217 361 aa25.49■■□□□ 1.67
PABPN1-201ENST00000216727 ECI1P42126 302 aa25.49■■□□□ 1.67
PABPN1-201ENST00000216727 ARPC4P59998 168 aa25.49■■□□□ 1.67
PABPN1-201ENST00000216727 DAZAP2Q15038 168 aaPredicted RBP25.49■■□□□ 1.67
PABPN1-201ENST00000216727 NHLRC3Q5JS37 347 aa25.49■■□□□ 1.67
PABPN1-201ENST00000216727 INO80CQ6PI98 192 aaPredicted RBP25.49■■□□□ 1.67
PABPN1-201ENST00000216727 TMEM230Q96A57 120 aa25.49■■□□□ 1.67
PABPN1-201ENST00000216727 L7N2F9 121 aa25.49■■□□□ 1.67
PABPN1-201ENST00000216727 COX5AP20674 150 aa25.49■■□□□ 1.67
PABPN1-201ENST00000216727 Q6ZS92 163 aa25.49■■□□□ 1.67
PABPN1-201ENST00000216727 MKXQ8IYA7 352 aa25.49■■□□□ 1.67
PABPN1-201ENST00000216727 RTBDNQ9BSG5 229 aaPredicted RBP25.49■■□□□ 1.67
PABPN1-201ENST00000216727 RFPL4AA6NLU0 287 aa25.48■■□□□ 1.67
PABPN1-201ENST00000216727 RFPL4AL1F8VTS6 287 aa25.48■■□□□ 1.67
PABPN1-201ENST00000216727 M0R233 179 aa25.48■■□□□ 1.67
PABPN1-201ENST00000216727 KLK10O43240 276 aa25.48■■□□□ 1.67
PABPN1-201ENST00000216727 MPC2O95563 127 aa25.48■■□□□ 1.67
PABPN1-201ENST00000216727 FBXW12Q6X9E4 464 aa25.48■■□□□ 1.67
PABPN1-201ENST00000216727 ASCL5Q7RTU5 278 aa25.48■■□□□ 1.67
PABPN1-201ENST00000216727 C1orf162Q8NEQ5 155 aaPredicted RBP25.48■■□□□ 1.67
PABPN1-201ENST00000216727 OR5H14A6NHG9 310 aa25.47■■□□□ 1.67
PABPN1-201ENST00000216727 OR5B21A6NL26 309 aa25.47■■□□□ 1.67
PABPN1-201ENST00000216727 DBX1A6NMT0 343 aa25.47■■□□□ 1.67
PABPN1-201ENST00000216727 TPD52L2O43399 206 aaKnown RBP25.47■■□□□ 1.67
PABPN1-201ENST00000216727 BCL3P20749 454 aa25.47■■□□□ 1.67
PABPN1-201ENST00000216727 FGF12P61328 243 aa25.47■■□□□ 1.67
PABPN1-201ENST00000216727 FGL1Q08830 312 aa25.47■■□□□ 1.67
PABPN1-201ENST00000216727 OPCMLQ14982 345 aa25.47■■□□□ 1.67
PABPN1-201ENST00000216727 SLAMF9Q96A28 289 aa25.47■■□□□ 1.67
PABPN1-201ENST00000216727 MYPOPQ86VE0 399 aaPredicted RBP25.47■■□□□ 1.67
PABPN1-201ENST00000216727 BHLHE23Q8NDY6 225 aa25.47■■□□□ 1.67
PABPN1-201ENST00000216727 CASTOR1Q8WTX7 329 aa25.47■■□□□ 1.67
PABPN1-201ENST00000216727 DPCDQ9BVM2 203 aaPredicted RBP25.47■■□□□ 1.67
PABPN1-201ENST00000216727 PRRC2CQ9Y520 2896 aaKnown RBP25.47■■□□□ 1.67
PABPN1-201ENST00000216727 CELA3BP08861 270 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 VWA1Q6PCB0 445 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 PLSCR4Q9NRQ2 329 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 DECR2Q9NUI1 292 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 DKK4Q9UBT3 224 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 A0A0B4J2A0 478 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 SMPD2O60906 423 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 OR7C1O76099 320 aaPredicted RBP25.46■■□□□ 1.67
PABPN1-201ENST00000216727 SFT2D2O95562 160 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 SORDQ00796 357 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 IKZF1Q13422 519 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 ZNF660Q6AZW8 331 aaPredicted RBP25.46■■□□□ 1.67
PABPN1-201ENST00000216727 TMEM211Q6ICI0 200 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 OR51B6Q9H340 312 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 CDH20Q9HBT6 801 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 MTCH1Q9NZJ7 389 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 SHPKQ9UHJ6 478 aa25.46■■□□□ 1.67
PABPN1-201ENST00000216727 FXYD6-FXYD2A0A087WZ82 144 aa25.45■■□□□ 1.66
PABPN1-201ENST00000216727 ARPC5O15511 151 aa25.45■■□□□ 1.66
PABPN1-201ENST00000216727 LILRA1O75019 489 aa25.45■■□□□ 1.66
PABPN1-201ENST00000216727 IDH3GP51553 393 aaPredicted RBP25.45■■□□□ 1.66
PABPN1-201ENST00000216727 OR2T2Q6IF00 324 aa25.45■■□□□ 1.66
PABPN1-201ENST00000216727 FXYD6Q9H0Q3 95 aa25.45■■□□□ 1.66
PABPN1-201ENST00000216727 C12orf4Q9NQ89 552 aa25.45■■□□□ 1.66
PABPN1-201ENST00000216727 NECAP2Q9NVZ3 263 aa25.45■■□□□ 1.66
PABPN1-201ENST00000216727 CFAP47Q6ZTR5 3102 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 TRAV14DV4A0A0A6YYC5 116 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 OPRM1P35372 400 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 GNG3P63215 75 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 BRICD5Q6PL45 260 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 ZNF573Q86YE8 665 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 PDCD10Q9BUL8 212 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 LHX6Q9UPM6 363 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 A0A1W2PR80 420 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 TRAPPC2LH3BP13 241 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 IFNA7P01567 189 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 OR5H8P0DN80 308 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 BAMBIQ13145 260 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 SNIP1Q8TAD8 396 aaKnown RBP25.44■■□□□ 1.66
PABPN1-201ENST00000216727 DYRK2Q92630 601 aa25.44■■□□□ 1.66
PABPN1-201ENST00000216727 ZNF2Q9BSG1 426 aaPredicted RBP25.44■■□□□ 1.66
PABPN1-201ENST00000216727 CCSO14618 274 aa25.43■■□□□ 1.66
PABPN1-201ENST00000216727 CBR1P16152 277 aa25.43■■□□□ 1.66
PABPN1-201ENST00000216727 IL32P24001 234 aa25.43■■□□□ 1.66
PABPN1-201ENST00000216727 SUPT4H1P63272 117 aaKnown RBP25.43■■□□□ 1.66
PABPN1-201ENST00000216727 FOXF2Q12947 444 aa25.43■■□□□ 1.66
PABPN1-201ENST00000216727 ZNF585AQ6P3V2 769 aa25.43■■□□□ 1.66
PABPN1-201ENST00000216727 DHRS11Q6UWP2 260 aa25.43■■□□□ 1.66
PABPN1-201ENST00000216727 CLEC18BQ6UXF7 455 aa25.43■■□□□ 1.66
PABPN1-201ENST00000216727 DHRS9Q9BPW9 319 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms