RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 C4orf3Q8WVX3 66 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 CAPSLQ8WWF8 208 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 AQP3Q92482 292 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF488Q96MN9 340 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 C1orf21Q9H246 121 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 RETNQ9HD89 108 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 ISYNA1Q9NPH2 558 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 RPRD1BQ9NQG5 326 aaKnown RBP6.27□□□□□ -1.41
SCARB2-226ENST00000640916 THAP1Q9NVV9 213 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 DPM3Q9P2X0 92 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 MOB4Q9Y3A3 225 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 HSPE1-MOB4S4R3N1 261 aa6.27□□□□□ -1.41
SCARB2-226ENST00000640916 DNAH6Q9C0G6 4158 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 DNAH2Q9P225 4427 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 MAGEA13PA6NCF6 341 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 ANXA2P2A6NMY6 339 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 K7N7A8 449 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 TBX1O43435 398 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF737O75373 536 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 DEDDO75618 318 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 TROVE2P10155 538 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCARB2-226ENST00000640916 HIST1H1CP16403 213 aaKnown RBP6.26□□□□□ -1.41
SCARB2-226ENST00000640916 OMPP47874 163 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 GPM6AP51674 278 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 SLC35B1P78383 322 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 BDH1Q02338 343 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 CFHR3Q02985 330 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 IL18R1Q13478 541 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 TRAM2Q15035 370 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 UTF1Q5T230 341 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 CFAP161Q6P656 301 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 EPGNQ6UW88 154 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF730Q6ZMV8 503 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 DCXRQ7Z4W1 244 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 MREGQ8N565 214 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 CSNK2A3Q8NEV1 391 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 OR4K13Q8NH42 304 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 MYOZ3Q8TDC0 251 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 DCUN1D4Q92564 292 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 SLAMF6Q96DU3 332 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 MISP3Q96FF7 219 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF714Q96N38 554 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 CLUHP3Q96NS8 147 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 COPS4Q9BT78 406 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 CLEC7AQ9BXN2 247 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 ROPN1BQ9BZX4 212 aaPredicted RBP6.26□□□□□ -1.41
SCARB2-226ENST00000640916 TMEM133Q9H2Q1 129 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 ROPN1Q9HAT0 212 aaPredicted RBP6.26□□□□□ -1.41
SCARB2-226ENST00000640916 RASL12Q9NYN1 266 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 KCNG2Q9UJ96 466 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 SIRT4Q9Y6E7 314 aaPredicted RBP6.26□□□□□ -1.41
SCARB2-226ENST00000640916 SESN1Q9Y6P5 492 aa6.26□□□□□ -1.41
SCARB2-226ENST00000640916 A0A1W2PRQ8 180 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 TVP23AA6NH52 213 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF732B4DXR9 585 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 I3L521 148 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 SLC1A7O00341 560 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 HLA-DQA2P01906 255 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 PYCR1P32322 319 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 CX3CR1P49238 355 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 RPS6KA3P51812 740 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 SLC7A2P52569 658 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 FOXE3Q13461 319 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 GALEQ14376 348 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 TIGD6Q17RP2 521 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 PNLIPRP3Q17RR3 467 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 AGKQ53H12 422 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 CYBRD1Q53TN4 286 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 FAM53AQ6NSI3 398 aaPredicted RBP6.25□□□□□ -1.41
SCARB2-226ENST00000640916 KCTD8Q6ZWB6 473 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 MFSD4AQ8N468 514 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF676Q8N7Q3 588 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 POC1AQ8NBT0 407 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 PIGCQ92535 297 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 ERMAPQ96PL5 475 aaPredicted RBP6.25□□□□□ -1.41
SCARB2-226ENST00000640916 FNDC11Q9BVV2 318 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 HES4Q9HCC6 221 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 PAPOLBQ9NRJ5 636 aaKnown RBP6.25□□□□□ -1.41
SCARB2-226ENST00000640916 CENPMQ9NSP4 180 aa6.25□□□□□ -1.41
SCARB2-226ENST00000640916 HSPG2P98160 4391 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 H3BSH0 61 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 ARPC3O15145 178 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 NOS1APO75052 506 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-226ENST00000640916 IFNA6P05013 189 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 ANXA2P07355 339 aaKnown RBP6.24□□□□□ -1.41
SCARB2-226ENST00000640916 GDNFP39905 211 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 ZNF121P58317 390 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-226ENST00000640916 STX1BP61266 288 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 SELENOWP63302 87 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 GPR50Q13585 617 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 EIF2B1Q14232 305 aaKnown RBP6.24□□□□□ -1.41
SCARB2-226ENST00000640916 TNFAIP8L3Q5GJ75 292 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 CXorf66Q5JRM2 361 aaPredicted RBP6.24□□□□□ -1.41
SCARB2-226ENST00000640916 TPTE2P1Q5T6R2 138 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 FAM57BQ71RH2 274 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 CBLL1Q75N03 491 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 SLC35E3Q7Z769 313 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 VTCN1Q7Z7D3 282 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 LYPD6Q86Y78 171 aa6.24□□□□□ -1.41
SCARB2-226ENST00000640916 ZDHHC23Q8IYP9 409 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms