RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 ACTC1P68032 377 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 ACTA1P68133 377 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 COL10A1Q03692 680 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 C9orf152Q5JTZ5 239 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 LCN8Q6JVE9 175 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 TRPM8Q7Z2W7 1104 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 ZNF573Q86YE8 665 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 ZNF676Q8N7Q3 588 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 BBS1Q8NFJ9 593 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 OR4X2Q8NGF9 303 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 BCAS4Q8TDM0 211 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 OCSTAMPQ9BR26 566 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 DGCR6LQ9BY27 220 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 PBOV1Q9GZY1 135 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 FAM206AQ9NX38 181 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 SLC22A13Q9Y226 551 aa12.04□□□□□ -0.48
SYNE2-228ENST00000639659 A0A0U1RQV5 110 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 H3BUI4 141 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 LPLP06858 475 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 TCTEX1D4Q5JR98 221 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 OR2T5Q6IEZ7 315 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 C10orf99Q6UWK7 81 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 CALHM1Q8IU99 346 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 CPOQ8IVL8 374 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 DEFB107AQ8IZN7 70 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 OR2T29Q8NH02 315 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 TRMT10AQ8TBZ6 339 aaKnown RBP12.03□□□□□ -0.48
SYNE2-228ENST00000639659 ZNF714Q96N38 554 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 TEAD3Q99594 435 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 ZNF649Q9BS31 505 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 INPP5EQ9NRR6 644 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 IKZF2Q9UKS7 526 aa12.03□□□□□ -0.48
SYNE2-228ENST00000639659 DNAJC8O75937 253 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-228ENST00000639659 CCDC159P0C7I6 412 aa12.02□□□□□ -0.49
SYNE2-228ENST00000639659 AZGP1P25311 298 aaKnown RBP12.02□□□□□ -0.49
SYNE2-228ENST00000639659 MFGE8Q08431 387 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-228ENST00000639659 GINS1Q14691 196 aa12.02□□□□□ -0.49
SYNE2-228ENST00000639659 ABCA11PQ4W5N1 156 aa12.02□□□□□ -0.49
SYNE2-228ENST00000639659 C16orf89Q6UX73 402 aa12.02□□□□□ -0.49
SYNE2-228ENST00000639659 ANGPTL5Q86XS5 388 aa12.02□□□□□ -0.49
SYNE2-228ENST00000639659 TPRX1Q8N7U7 411 aa12.02□□□□□ -0.49
SYNE2-228ENST00000639659 OR11H6Q8NGC7 330 aa12.02□□□□□ -0.49
SYNE2-228ENST00000639659 NRIP2Q9BQI9 281 aa12.02□□□□□ -0.49
SYNE2-228ENST00000639659 CHID1Q9BWS9 393 aa12.02□□□□□ -0.49
SYNE2-228ENST00000639659 MROQ9BYG7 248 aa12.02□□□□□ -0.49
SYNE2-228ENST00000639659 TENM3Q9P273 2699 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 IGHV2-26A0A0B4J1V2 119 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 FAM230AA0A1W2PPH8 454 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 H3BSH0 61 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 K7N7A8 449 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 PRODHO43272 600 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 DHRS3O75911 302 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 DUS4LO95620 317 aaKnown RBP12.01□□□□□ -0.49
SYNE2-228ENST00000639659 CHRM2P08172 466 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 ATP6V1B1P15313 513 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 ALOX5APP20292 161 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 MAGEA2P43356 314 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 APOFQ13790 326 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 ZNF829Q3KNS6 432 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-228ENST00000639659 HSP90B2PQ58FF3 399 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 CLVS2Q5SYC1 327 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 KCTD18Q6PI47 426 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-228ENST00000639659 TRAPPC6BQ86SZ2 158 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 GIPC3Q8TF64 312 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 STMN2Q93045 179 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 AKR1E2Q96JD6 320 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 FEVQ99581 238 aa12.01□□□□□ -0.49
SYNE2-228ENST00000639659 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.01□□□□□ -0.49
SYNE2-228ENST00000639659 PQLC2LA1A4F0 135 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 FAM172BPA6NC97 362 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 DYNLT3P51808 116 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 RIDAP52758 137 aaKnown RBP12□□□□□ -0.49
SYNE2-228ENST00000639659 MINOS1Q5TGZ0 78 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 TCF23Q7RTU1 214 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 B9D2Q9BPU9 175 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 SLC25A33Q9BSK2 321 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 CLEC7AQ9BXN2 247 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 CHST6Q9GZX3 395 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 TAGLN3Q9UI15 199 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 SESN1Q9Y6P5 492 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 MINOS1-NBL1R4GNA1 71 aa12□□□□□ -0.49
SYNE2-228ENST00000639659 hADV38S2A0JD32 116 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 ACOD1A6NK06 481 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 PRR32B1ATL7 298 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 LOC110117498-PIK3R3F6TDL0 507 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 NOS1APO75052 506 aaPredicted RBP11.99□□□□□ -0.49
SYNE2-228ENST00000639659 RBP4P02753 201 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 GABRR1P24046 479 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 HTR1DP28221 377 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 SNU13P55769 128 aaKnown RBP11.99□□□□□ -0.49
SYNE2-228ENST00000639659 IL18R1Q13478 541 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 FAM98BQ52LJ0 330 aaKnown RBP11.99□□□□□ -0.49
SYNE2-228ENST00000639659 BCL2L15Q5TBC7 163 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 PLEKHG7Q6ZR37 379 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 SLAMF9Q96A28 289 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 GPR61Q9BZJ8 451 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 HES4Q9HCC6 221 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 ARL8BQ9NVJ2 186 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.99□□□□□ -0.49
SYNE2-228ENST00000639659 ACTR3BQ9P1U1 418 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms