RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 AGKQ53H12 422 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 TPTE2P1Q5T6R2 138 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 OR52W1Q6IF63 320 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 SMARCD3Q6STE5 483 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 THNSL2Q86YJ6 484 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 RNF152Q8N8N0 203 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 POC1AQ8NBT0 407 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 OR4K13Q8NH42 304 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 HRASLS5Q96KN8 279 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 CGREF1Q99674 301 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 FAM110AQ9BQ89 295 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 TMEM120AQ9BXJ8 343 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 FGF23Q9GZV9 251 aaPredicted RBP8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 RETNQ9HD89 108 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 SLC22A13Q9Y226 551 aa8.54□□□□□ -1.04
PTP4A1-207ENST00000639568 KMT2AQ03164 3969 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 TVP23AA6NH52 213 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 DEDDO75618 318 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 SPARCP09486 303 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 TMEM11P17152 192 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 ESRRGP62508 458 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 RBM39Q14498 530 aaKnown RBP8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 EDDM3AQ14507 147 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 HNF4GQ14541 408 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 CEACAM21Q3KPI0 293 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 CYBRD1Q53TN4 286 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 TRAPPC6BQ86SZ2 158 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 MREGQ8N565 214 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 PROKR2Q8NFJ6 384 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 PGAM5Q96HS1 289 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 RSRC1Q96IZ7 334 aaKnown RBP8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 ZNF488Q96MN9 340 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 OR4C12Q96R67 309 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 FN3KQ9H479 309 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 CCDC134Q9H6E4 229 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 VIPAS39Q9H9C1 493 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 BRD7Q9NPI1 651 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 DNAJC27Q9NZQ0 273 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 LINC00312Q9Y6C7 94 aa8.53□□□□□ -1.04
PTP4A1-207ENST00000639568 LINC01548A6NM66 108 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 OOSP1A8MZH6 123 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 BUB1B-PAK6H3BSN5 160 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 J3KTA2 159 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 SNNO75324 88 aaPredicted RBP8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 OR8U9P0C7N5 309 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 HIST1H1CP16403 213 aaKnown RBP8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 VDAC1P21796 283 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 ACKR3P25106 362 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 GPR12P47775 334 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 PRRX1P54821 245 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 ISL1P61371 349 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 LRRC23Q53EV4 343 aaPredicted RBP8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 FGD3Q5JSP0 725 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 CEP78Q5JTW2 689 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 ACSM6Q6P461 480 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 TMEM65Q6PI78 240 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 FAM81AQ8TBF8 368 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 TMED9Q9BVK6 235 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 SSU72Q9NP77 194 aaKnown RBP8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 PCDHB16Q9NRJ7 776 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 ACTR3BQ9P1U1 418 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 KIAA1456Q9P272 454 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 DNAJB9Q9UBS3 223 aa8.52□□□□□ -1.05
PTP4A1-207ENST00000639568 NUPR2A6NF83 97 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 UNC119BA6NIH7 251 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 OR5B21A6NL26 309 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 NCBP2LA6PVI3 153 aaKnown RBP8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 C12orf77C9JDV5 145 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 FFAR1O14842 300 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 ANGPT2O15123 496 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 HSPA12AO43301 675 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 PYCR1P32322 319 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 ZNF121P58317 390 aaPredicted RBP8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 PMS2P11Q13670 270 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 OR8H2Q8N162 312 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 FAM86B1Q8N7N1 296 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 OR5A2Q8NGI9 324 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 OR56B4Q8NH76 319 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 DLX4Q92988 240 aaPredicted RBP8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 RPEQ96AT9 228 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 UBE2E2Q96LR5 201 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 C16orf45Q96MC5 204 aaPredicted RBP8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 OR5B12Q96R08 314 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 IFT27Q9BW83 186 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 PLA2G2EQ9NZK7 142 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 POLDIP2Q9Y2S7 368 aa8.51□□□□□ -1.05
PTP4A1-207ENST00000639568 FAM172BPA6NC97 362 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 MAGEA13PA6NCF6 341 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 FAM90A18PA6NE21 464 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 FAM90A16PA6NEW6 464 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 FAM90A20PA6NIJ5 464 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 FAM90A9PA6NNJ1 464 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 FAM90A12PA8MX19 464 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 FAM90A5PA8MXJ8 464 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 ZNF593O00488 134 aaPredicted RBP8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 ARPC3O15145 178 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 MMP23AO75900 390 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 IGLV1-47P01700 117 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 IGHG4P01861 327 aa8.5□□□□□ -1.05
PTP4A1-207ENST00000639568 FAM90A15PP0C7V4 464 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms